Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm22304-201ENSMUST00000082688 129 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm24533-201ENSMUST00000083138 196 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm24453-201ENSMUST00000083346 76 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm23247-201ENSMUST00000083373 107 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Mir146-201ENSMUST00000083667 65 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm25538-201ENSMUST00000101943 107 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm22472-201ENSMUST00000104115 134 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm23530-201ENSMUST00000104564 137 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm16327-201ENSMUST00000137146 228 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm16533-201ENSMUST00000140035 228 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm23209-201ENSMUST00000158667 110 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm44352-201ENSMUST00000196358 110 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm9765-201ENSMUST00000043170 321 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.88□□□□□ -1.79
Clp1Q99LI9 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Clp1Q99LI9 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.87□□□□□ -1.79
Clp1Q99LI9 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.87□□□□□ -1.79
Clp1Q99LI9 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Clp1Q99LI9 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Clp1Q99LI9 Gm26249-201ENSMUST00000116708 118 ntBASIC3.87□□□□□ -1.79
Clp1Q99LI9 Gm14748-201ENSMUST00000119819 411 ntBASIC3.87□□□□□ -1.79
Clp1Q99LI9 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.87□□□□□ -1.79
Clp1Q99LI9 Gm25253-201ENSMUST00000179958 107 ntBASIC3.87□□□□□ -1.79
Clp1Q99LI9 Gm37698-201ENSMUST00000192605 463 ntBASIC3.87□□□□□ -1.79
Clp1Q99LI9 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Clp1Q99LI9 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Clp1Q99LI9 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.87□□□□□ -1.79
Clp1Q99LI9 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Clp1Q99LI9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Clp1Q99LI9 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Clp1Q99LI9 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Clp1Q99LI9 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Clp1Q99LI9 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Gm15497-201ENSMUST00000119137 551 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Gm12155-201ENSMUST00000121267 160 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Clp1Q99LI9 Gm19901-201ENSMUST00000192191 495 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Gm32175-201ENSMUST00000193641 346 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Gm44459-201ENSMUST00000203926 160 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.86□□□□□ -1.79
Clp1Q99LI9 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Clp1Q99LI9 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Clp1Q99LI9 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.86□□□□□ -1.79
Clp1Q99LI9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Clp1Q99LI9 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Clp1Q99LI9 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Clp1Q99LI9 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Clp1Q99LI9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.85□□□□□ -1.79
Clp1Q99LI9 Mir767-201ENSMUST00000103256 107 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 Gm12550-201ENSMUST00000118478 329 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 Gm15466-201ENSMUST00000122299 333 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.85□□□□□ -1.79
Clp1Q99LI9 Gm38311-201ENSMUST00000192945 165 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Clp1Q99LI9 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 Gm22704-201ENSMUST00000083027 137 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.85□□□□□ -1.79
Clp1Q99LI9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm26412-201ENSMUST00000157666 55 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm25494-201ENSMUST00000158143 100 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm22989-201ENSMUST00000158313 86 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm27470-201ENSMUST00000184070 210 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm43155-201ENSMUST00000202661 494 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.84□□□□□ -1.79
Clp1Q99LI9 Gm6030-201ENSMUST00000078768 402 ntBASIC3.84□□□□□ -1.79
Clp1Q99LI9 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Clp1Q99LI9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
Clp1Q99LI9 Gm24118-201ENSMUST00000103972 126 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm11356-201ENSMUST00000118974 192 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm12926-201ENSMUST00000121158 409 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.83□□□□□ -1.8
Clp1Q99LI9 Gm23775-201ENSMUST00000158991 249 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms