Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mir297a-2-201ENSMUST00000103795 90 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm23841-201ENSMUST00000116951 114 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm6071-201ENSMUST00000119561 440 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm12771-201ENSMUST00000120246 135 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm11786-201ENSMUST00000120799 155 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm12276-201ENSMUST00000121709 301 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm14564-201ENSMUST00000122159 294 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm22310-201ENSMUST00000157509 116 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.97□□□□□ -1.77
TraipQ8VIG6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm17966-201ENSMUST00000193453 594 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm37097-201ENSMUST00000193676 336 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm44294-201ENSMUST00000205090 728 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm45859-201ENSMUST00000212794 214 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm10092-201ENSMUST00000077110 180 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Snora7a-201ENSMUST00000082629 140 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 Gm24355-201ENSMUST00000082858 122 ntBASIC3.97□□□□□ -1.77
TraipQ8VIG6 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
TraipQ8VIG6 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
TraipQ8VIG6 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TraipQ8VIG6 Gm25748-201ENSMUST00000175487 70 ntBASIC3.96□□□□□ -1.78
TraipQ8VIG6 Gm37617-201ENSMUST00000194309 159 ntBASIC3.96□□□□□ -1.78
TraipQ8VIG6 Gm43220-201ENSMUST00000199299 282 ntBASIC3.96□□□□□ -1.78
TraipQ8VIG6 Gm44666-201ENSMUST00000208544 391 ntBASIC3.96□□□□□ -1.78
TraipQ8VIG6 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.96□□□□□ -1.78
TraipQ8VIG6 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.96□□□□□ -1.78
TraipQ8VIG6 Gm26495-201ENSMUST00000083152 137 ntBASIC3.96□□□□□ -1.78
TraipQ8VIG6 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
TraipQ8VIG6 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TraipQ8VIG6 AC122828.3-201ENSMUST00000223019 3915 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Mir541-201ENSMUST00000102097 90 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm24640-201ENSMUST00000116949 126 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm22626-201ENSMUST00000116990 126 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Mir1934-201ENSMUST00000158127 83 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm22890-201ENSMUST00000158642 144 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm20613-201ENSMUST00000175828 345 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm24304-201ENSMUST00000177635 107 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm7958-201ENSMUST00000178255 468 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm24761-201ENSMUST00000179589 127 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm7950-201ENSMUST00000179633 468 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm24488-201ENSMUST00000179934 127 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm25701-201ENSMUST00000179988 127 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm26431-201ENSMUST00000180199 127 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm43899-201ENSMUST00000203675 246 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gm43993-201ENSMUST00000203972 247 ntBASIC3.95□□□□□ -1.78
TraipQ8VIG6 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TraipQ8VIG6 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
TraipQ8VIG6 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TraipQ8VIG6 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm1980-201ENSMUST00000123131 2306 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm25272-201ENSMUST00000104293 128 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm24403-201ENSMUST00000104616 130 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm24683-201ENSMUST00000104840 88 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm16005-201ENSMUST00000120515 269 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm24896-201ENSMUST00000122741 135 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm22792-201ENSMUST00000157225 133 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm23602-201ENSMUST00000157258 132 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm20399-201ENSMUST00000174652 132 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm27903-201ENSMUST00000175482 126 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm28010-201ENSMUST00000179485 126 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm20734-201ENSMUST00000216939 193 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm24204-201ENSMUST00000082950 107 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TraipQ8VIG6 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.94□□□□□ -1.78
TraipQ8VIG6 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.93□□□□□ -1.78
TraipQ8VIG6 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm22193-201ENSMUST00000116868 76 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm8244-201ENSMUST00000121254 264 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm26105-201ENSMUST00000157253 190 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm24008-201ENSMUST00000157733 138 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm25860-201ENSMUST00000158252 126 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Mir1936-201ENSMUST00000158699 93 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.93□□□□□ -1.78
TraipQ8VIG6 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Mir7047-201ENSMUST00000184595 64 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm37918-201ENSMUST00000192071 120 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm37698-201ENSMUST00000192605 463 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm32175-201ENSMUST00000193641 346 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm44355-201ENSMUST00000200417 104 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm43264-201ENSMUST00000202284 325 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm24147-201ENSMUST00000082763 144 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm26126-201ENSMUST00000083188 164 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Mir101b-201ENSMUST00000083622 97 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.93□□□□□ -1.78
TraipQ8VIG6 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TraipQ8VIG6 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TraipQ8VIG6 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TraipQ8VIG6 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
TraipQ8VIG6 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.92□□□□□ -1.78
TraipQ8VIG6 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
TraipQ8VIG6 Gm24987-201ENSMUST00000104453 134 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 178.2 ms