Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm12213-201ENSMUST00000119924 353 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm24818-201ENSMUST00000175093 161 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Mir3965-201ENSMUST00000175570 69 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm7258-201ENSMUST00000179317 300 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Mir6481-201ENSMUST00000184617 110 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm28744-201ENSMUST00000189939 340 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm37162-201ENSMUST00000191708 551 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm43250-201ENSMUST00000196536 273 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm43746-201ENSMUST00000200028 317 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC3.39□□□□□ -1.87
Ushbp1Q8R370 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.39□□□□□ -1.87
Ushbp1Q8R370 AC151833.1-201ENSMUST00000227752 574 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm22358-201ENSMUST00000082877 122 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm25401-201ENSMUST00000082975 106 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Mir184-201ENSMUST00000083662 69 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm25188-201ENSMUST00000083913 122 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm24079-201ENSMUST00000104352 132 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm15282-201ENSMUST00000117707 300 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm14774-201ENSMUST00000117857 536 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm12954-201ENSMUST00000118610 611 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm12723-201ENSMUST00000120700 451 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm24691-201ENSMUST00000157762 140 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm23641-201ENSMUST00000157857 101 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm25333-201ENSMUST00000158035 246 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm27532-201ENSMUST00000183726 113 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm36946-201ENSMUST00000192706 435 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm23370-202ENSMUST00000197008 129 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm43521-201ENSMUST00000197838 255 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm43107-201ENSMUST00000198729 255 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm43901-201ENSMUST00000203247 453 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 AC133517.1-203ENSMUST00000225570 390 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm22620-201ENSMUST00000082700 133 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm23738-201ENSMUST00000082828 171 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.38□□□□□ -1.87
Ushbp1Q8R370 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm22674-201ENSMUST00000104413 131 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm22961-201ENSMUST00000157964 106 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm23933-201ENSMUST00000178405 79 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm26928-201ENSMUST00000182674 572 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm44010-201ENSMUST00000204432 331 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm25202-201ENSMUST00000082838 191 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Mir32-201ENSMUST00000083610 70 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm25651-201ENSMUST00000083782 119 ntBASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ushbp1Q8R370 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Gm23232-201ENSMUST00000157300 105 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Gm22187-201ENSMUST00000157819 129 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Gm28921-201ENSMUST00000190219 378 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Gm30341-201ENSMUST00000194363 289 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Gm4945-201ENSMUST00000075152 453 ntBASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Ushbp1Q8R370 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm5967-201ENSMUST00000172723 494 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm26297-201ENSMUST00000179464 132 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm27796-201ENSMUST00000183863 261 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm5329-201ENSMUST00000186898 463 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm37713-201ENSMUST00000191746 198 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Trbv7-201ENSMUST00000193339 402 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm44476-201ENSMUST00000196225 91 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 Gm42672-201ENSMUST00000197821 352 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.35□□□□□ -1.87
Ushbp1Q8R370 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms