Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm12723-201ENSMUST00000120700 451 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm16533-201ENSMUST00000140035 228 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm26099-201ENSMUST00000157248 109 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm25373-201ENSMUST00000158156 115 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm24726-201ENSMUST00000158232 121 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm24501-201ENSMUST00000158452 62 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm43193-201ENSMUST00000197732 441 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm2829-201ENSMUST00000213121 499 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm23845-201ENSMUST00000083834 152 ntBASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc87Q8CDL9 Gm15010-201ENSMUST00000117153 407 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm12956-201ENSMUST00000122184 414 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm23668-201ENSMUST00000157465 111 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm27783-201ENSMUST00000183534 105 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm27700-201ENSMUST00000185003 81 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm6060-201ENSMUST00000188671 251 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm36891-201ENSMUST00000191995 655 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm37586-201ENSMUST00000193654 204 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm23055-201ENSMUST00000082805 94 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
Ccdc87Q8CDL9 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm13378-201ENSMUST00000117483 336 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm12550-201ENSMUST00000118478 329 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm13210-201ENSMUST00000121483 273 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm15065-201ENSMUST00000121699 273 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm13725-201ENSMUST00000122139 207 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm23589-201ENSMUST00000157660 105 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm22316-201ENSMUST00000158012 216 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm23380-201ENSMUST00000158448 103 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Mir5123-201ENSMUST00000177794 83 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm36946-201ENSMUST00000192706 435 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm38311-201ENSMUST00000192945 165 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm37037-201ENSMUST00000194475 424 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm2077-201ENSMUST00000195017 319 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Mir7661-201ENSMUST00000197023 61 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm43746-201ENSMUST00000200028 317 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm44473-201ENSMUST00000204039 152 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm44966-201ENSMUST00000208096 157 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm45296-201ENSMUST00000209625 205 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm23625-201ENSMUST00000082457 100 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Ccdc87Q8CDL9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Snord14c-201ENSMUST00000101927 86 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm11253-201ENSMUST00000118486 201 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm12513-201ENSMUST00000118617 352 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm11414-201ENSMUST00000121795 263 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm14389-201ENSMUST00000140453 241 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm23581-201ENSMUST00000158531 63 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm24348-201ENSMUST00000158710 130 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm27997-201ENSMUST00000184942 69 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm28257-201ENSMUST00000185244 463 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm37801-201ENSMUST00000194754 274 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm43250-201ENSMUST00000196536 273 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm29818-201ENSMUST00000218070 165 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm22249-201ENSMUST00000082485 136 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm23462-201ENSMUST00000083264 104 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Mir124a-3-201ENSMUST00000083520 68 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm23731-201ENSMUST00000083749 107 ntBASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ccdc87Q8CDL9 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc87Q8CDL9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC3.11□□□□□ -1.91
Ccdc87Q8CDL9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC3.11□□□□□ -1.91
Ccdc87Q8CDL9 Gm12213-201ENSMUST00000119924 353 ntBASIC3.11□□□□□ -1.91
Ccdc87Q8CDL9 Gm24630-201ENSMUST00000122768 106 ntBASIC3.11□□□□□ -1.91
Ccdc87Q8CDL9 Gm23232-201ENSMUST00000157300 105 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 7.1 ms