Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm37399-201ENSMUST00000195224 416 ntBASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 Gm40810-201ENSMUST00000219149 253 ntBASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 Gm22997-201ENSMUST00000082845 107 ntBASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 Gm44708-201ENSMUST00000205580 2237 ntBASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.36□□□□□ -2.35
Col6a6Q8C6K9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm17100-201ENSMUST00000168963 272 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm24264-201ENSMUST00000179835 94 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm45439-201ENSMUST00000211723 359 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm45263-201ENSMUST00000210377 1375 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm12636-201ENSMUST00000117395 624 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm12656-201ENSMUST00000118149 577 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm23656-201ENSMUST00000122626 112 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm25949-201ENSMUST00000175333 114 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm21758-201ENSMUST00000179336 819 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm24020-201ENSMUST00000180156 108 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm28241-201ENSMUST00000190916 235 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm35843-201ENSMUST00000193716 666 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm23370-202ENSMUST00000197008 129 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm43245-201ENSMUST00000197603 468 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Snora41-201ENSMUST00000082668 132 ntBASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
Col6a6Q8C6K9 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
Col6a6Q8C6K9 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC0.34□□□□□ -2.35
Col6a6Q8C6K9 Mir3473a-201ENSMUST00000175011 78 ntBASIC0.34□□□□□ -2.35
Col6a6Q8C6K9 Mir191-201ENSMUST00000196210 74 ntBASIC0.34□□□□□ -2.35
Col6a6Q8C6K9 Gm43493-201ENSMUST00000199837 202 ntBASIC0.34□□□□□ -2.35
Col6a6Q8C6K9 Gm22302-201ENSMUST00000082657 106 ntBASIC0.34□□□□□ -2.35
Col6a6Q8C6K9 Gm23202-201ENSMUST00000104376 129 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm24588-201ENSMUST00000116696 83 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm22675-201ENSMUST00000158430 104 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm24229-201ENSMUST00000158830 118 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm25243-201ENSMUST00000174912 207 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm21815-201ENSMUST00000178213 664 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm28843-201ENSMUST00000189198 678 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm29546-201ENSMUST00000191171 678 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm18039-201ENSMUST00000217816 728 ntBASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Col6a6Q8C6K9 Gm25611-201ENSMUST00000104017 133 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm6025-201ENSMUST00000121517 201 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm20409-201ENSMUST00000173457 130 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm22633-201ENSMUST00000179834 107 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm24311-201ENSMUST00000082570 104 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm22443-201ENSMUST00000082890 107 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm26327-201ENSMUST00000093724 111 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm24282-201ENSMUST00000104232 66 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm13482-201ENSMUST00000119842 254 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm15861-201ENSMUST00000120979 339 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm13356-201ENSMUST00000121678 335 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm14629-201ENSMUST00000122428 144 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm22960-201ENSMUST00000122517 104 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm26189-201ENSMUST00000179879 107 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm21937-201ENSMUST00000222825 218 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 AC158142.3-201ENSMUST00000226230 675 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 AC125464.1-201ENSMUST00000228013 512 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Snord32a-201ENSMUST00000083285 83 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Gm25257-201ENSMUST00000083907 110 ntBASIC0.33□□□□□ -2.36
Col6a6Q8C6K9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm14731-201ENSMUST00000119216 376 ntBASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm14716-201ENSMUST00000120138 718 ntBASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm27517-201ENSMUST00000184347 236 ntBASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm44336-201ENSMUST00000203696 468 ntBASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm43955-201ENSMUST00000204332 142 ntBASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm22265-201ENSMUST00000082947 116 ntBASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.32□□□□□ -2.36
Col6a6Q8C6K9 Gm22496-201ENSMUST00000104493 88 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm14852-201ENSMUST00000120065 647 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm14761-201ENSMUST00000121363 262 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm23208-201ENSMUST00000158666 127 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm25175-201ENSMUST00000178712 79 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm27717-201ENSMUST00000183933 151 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Mir7675-201ENSMUST00000184262 58 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm37002-201ENSMUST00000194560 373 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm22678-201ENSMUST00000116974 101 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm13992-201ENSMUST00000120558 156 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm22731-201ENSMUST00000158086 94 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm22527-201ENSMUST00000158816 106 ntBASIC0.31□□□□□ -2.36
Col6a6Q8C6K9 Gm27013-201ENSMUST00000182441 1024 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms