Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm23772-201ENSMUST00000104433 102 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm22561-201ENSMUST00000157331 84 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm25060-201ENSMUST00000157374 130 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm29553-201ENSMUST00000189692 279 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm43264-201ENSMUST00000202284 325 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim47Q8C0E3 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Gm22248-201ENSMUST00000082482 150 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 AC159625.1-201ENSMUST00000220994 2625 ntBASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim47Q8C0E3 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Trim47Q8C0E3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm25833-201ENSMUST00000104137 133 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Mir294-201ENSMUST00000104710 84 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm14586-201ENSMUST00000119571 408 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm8840-201ENSMUST00000122454 386 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm24716-201ENSMUST00000157524 104 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm23084-201ENSMUST00000157850 114 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm25369-201ENSMUST00000158848 132 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm27189-201ENSMUST00000184119 190 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm27249-201ENSMUST00000185049 328 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.26□□□□□ -1.73
Trim47Q8C0E3 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm25681-201ENSMUST00000083938 106 ntBASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim47Q8C0E3 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm24283-201ENSMUST00000104233 107 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm13761-201ENSMUST00000117238 807 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm6079-201ENSMUST00000121356 404 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm14629-201ENSMUST00000122428 144 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm22141-201ENSMUST00000157403 277 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm22850-201ENSMUST00000157714 82 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm23865-201ENSMUST00000157723 97 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Snord50a-201ENSMUST00000178154 72 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm24463-201ENSMUST00000178417 72 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Mir6408-201ENSMUST00000183643 91 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm36964-201ENSMUST00000191876 198 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm42862-201ENSMUST00000197494 2621 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm44524-201ENSMUST00000203899 271 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 AC126939.3-201ENSMUST00000226061 166 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Gm25789-201ENSMUST00000083294 76 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim47Q8C0E3 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim47Q8C0E3 AC153522.2-201ENSMUST00000218389 3853 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm24831-201ENSMUST00000116778 126 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm24842-201ENSMUST00000158681 54 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm10357-201ENSMUST00000159886 264 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm28924-201ENSMUST00000190012 241 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm37116-201ENSMUST00000195161 147 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm43587-201ENSMUST00000199590 204 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm45006-201ENSMUST00000206078 690 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 CT571266.1-201ENSMUST00000222859 153 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Mir186-201ENSMUST00000083497 71 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm42635-201ENSMUST00000200266 2571 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Gm37626-201ENSMUST00000194332 4563 ntBASIC4.24□□□□□ -1.73
Trim47Q8C0E3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm26421-201ENSMUST00000104279 132 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm14536-201ENSMUST00000118324 138 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm12458-201ENSMUST00000119387 495 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm15027-201ENSMUST00000120922 138 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm26360-201ENSMUST00000158872 103 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm15235-201ENSMUST00000200572 194 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC4.23□□□□□ -1.73
Trim47Q8C0E3 AC167669.4-201ENSMUST00000225967 140 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm26449-201ENSMUST00000082452 104 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.23□□□□□ -1.73
Trim47Q8C0E3 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms