Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm13273-201ENSMUST00000119737 159 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm22349-201ENSMUST00000157864 107 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm43521-201ENSMUST00000197838 255 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm43107-201ENSMUST00000198729 255 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm30674-201ENSMUST00000214523 392 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Mir146-201ENSMUST00000083667 65 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Usp40Q8BWR4 Gm45662-201ENSMUST00000210054 2098 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm25466-201ENSMUST00000103995 132 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm14008-201ENSMUST00000120483 274 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm11204-201ENSMUST00000122438 147 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm23184-201ENSMUST00000122594 131 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm22606-201ENSMUST00000158290 103 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm25121-201ENSMUST00000179846 79 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Gm28500-201ENSMUST00000190286 151 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.04□□□□□ -1.76
Usp40Q8BWR4 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm12793-201ENSMUST00000119268 292 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm13419-201ENSMUST00000121711 271 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm23325-201ENSMUST00000157422 129 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm23642-201ENSMUST00000157858 258 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm16162-201ENSMUST00000162296 297 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm24084-201ENSMUST00000175173 137 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm22699-201ENSMUST00000175376 105 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm25020-201ENSMUST00000178071 107 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Mir6335-201ENSMUST00000184081 98 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm19901-201ENSMUST00000192191 495 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm44010-201ENSMUST00000204432 331 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm44208-201ENSMUST00000205199 421 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm8274-201ENSMUST00000219820 463 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm7065-201ENSMUST00000222150 474 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm18441-201ENSMUST00000223539 617 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm9818-201ENSMUST00000050900 255 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm23722-201ENSMUST00000083002 130 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm10351-201ENSMUST00000087694 125 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Usp40Q8BWR4 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Usp40Q8BWR4 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Usp40Q8BWR4 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Usp40Q8BWR4 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm26293-201ENSMUST00000104170 84 ntBASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm24015-201ENSMUST00000157725 232 ntBASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm17100-201ENSMUST00000168963 272 ntBASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.02□□□□□ -1.77
Usp40Q8BWR4 n-R5s40-201ENSMUST00000082475 124 ntBASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Gm23039-201ENSMUST00000083870 161 ntBASIC4.02□□□□□ -1.77
Usp40Q8BWR4 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm14782-201ENSMUST00000120151 195 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm14922-201ENSMUST00000121131 163 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm11334-201ENSMUST00000121969 156 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm22027-201ENSMUST00000122737 127 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm22212-201ENSMUST00000158096 106 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm22447-201ENSMUST00000158155 92 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm25863-201ENSMUST00000158249 329 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm37162-201ENSMUST00000191708 551 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm7182-201ENSMUST00000193351 732 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm30341-201ENSMUST00000194363 289 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Mir1a-2-201ENSMUST00000198520 72 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Snord80-202ENSMUST00000199023 77 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 AC069074.2-201ENSMUST00000217819 428 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Snord21-201ENSMUST00000082519 94 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm25930-201ENSMUST00000082785 107 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Gm24611-201ENSMUST00000083272 107 ntBASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Usp40Q8BWR4 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms