Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm12053-201ENSMUST00000119022 252 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Gm15266-201ENSMUST00000119635 255 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Gm5396-201ENSMUST00000121222 532 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Gm14366-201ENSMUST00000121970 730 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Mir6388-201ENSMUST00000184417 75 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Gm28151-201ENSMUST00000189404 951 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Gm45375-201ENSMUST00000210338 280 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Clrn3Q8BHH8 Mir582-201ENSMUST00000103758 81 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm17113-201ENSMUST00000170118 171 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm22862-201ENSMUST00000178593 121 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm22510-201ENSMUST00000179304 79 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm26336-201ENSMUST00000179449 79 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm26390-201ENSMUST00000179628 79 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm43739-201ENSMUST00000198294 307 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm44923-201ENSMUST00000206673 85 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm44655-201ENSMUST00000207768 423 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm44910-201ENSMUST00000208451 396 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm25589-201ENSMUST00000082502 166 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm23093-201ENSMUST00000083450 102 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Mir320-201ENSMUST00000083594 82 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.38□□□□□ -2.19
Clrn3Q8BHH8 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm14785-201ENSMUST00000120185 539 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm12779-201ENSMUST00000121496 143 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm24896-201ENSMUST00000122741 135 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm25059-201ENSMUST00000157367 117 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm23858-201ENSMUST00000158384 106 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm22075-201ENSMUST00000158599 192 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm24348-201ENSMUST00000158710 130 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm38333-201ENSMUST00000193608 604 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm18971-201ENSMUST00000197240 374 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Clrn3Q8BHH8 Gm26384-201ENSMUST00000102183 110 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm25541-201ENSMUST00000116888 126 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm14882-201ENSMUST00000117216 218 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm14823-201ENSMUST00000117698 238 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm12351-201ENSMUST00000118727 292 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm14362-201ENSMUST00000121679 273 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm24892-201ENSMUST00000122747 104 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm15254-201ENSMUST00000149567 273 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm25384-201ENSMUST00000157807 105 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm23144-201ENSMUST00000180226 107 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm43427-201ENSMUST00000198188 331 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm44408-201ENSMUST00000200205 66 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm44870-201ENSMUST00000207291 357 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm45658-201ENSMUST00000209197 580 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Clrn3Q8BHH8 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm24079-201ENSMUST00000104352 132 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm15861-201ENSMUST00000120979 339 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm23000-201ENSMUST00000157083 139 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm22559-201ENSMUST00000157329 134 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm23670-201ENSMUST00000157469 119 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm24241-201ENSMUST00000157787 145 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm23221-201ENSMUST00000158118 93 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm3111-201ENSMUST00000167426 490 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm20689-201ENSMUST00000176033 279 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm27517-201ENSMUST00000184347 236 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Mir496b-201ENSMUST00000184935 113 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Gm21064-202ENSMUST00000190583 278 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Clrn3Q8BHH8 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms