Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm24164-201ENSMUST00000093663 104 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim56Q80VI1 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm12443-201ENSMUST00000122308 323 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm22883-201ENSMUST00000157376 106 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm25599-201ENSMUST00000157816 103 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm22097-201ENSMUST00000157929 278 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm22516-201ENSMUST00000158266 124 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm16289-201ENSMUST00000162079 183 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm27374-201ENSMUST00000183660 81 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Mir6914-201ENSMUST00000184999 69 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.88□□□□□ -1.79
Trim56Q80VI1 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm29167-201ENSMUST00000190024 377 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm44563-201ENSMUST00000207958 178 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Gm23727-201ENSMUST00000083352 164 ntBASIC3.88□□□□□ -1.79
Trim56Q80VI1 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim56Q80VI1 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim56Q80VI1 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim56Q80VI1 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim56Q80VI1 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim56Q80VI1 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim56Q80VI1 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim56Q80VI1 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm26027-201ENSMUST00000122725 268 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm22026-201ENSMUST00000122735 281 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm24811-201ENSMUST00000175313 100 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm43749-201ENSMUST00000199345 352 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm44524-201ENSMUST00000203899 271 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm10298-201ENSMUST00000074801 265 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm9174-201ENSMUST00000078149 255 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Mir384-201ENSMUST00000083565 88 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Gm10242-201ENSMUST00000090064 330 ntBASIC3.87□□□□□ -1.79
Trim56Q80VI1 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim56Q80VI1 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.86□□□□□ -1.79
Trim56Q80VI1 Gm14020-201ENSMUST00000118165 662 ntBASIC3.86□□□□□ -1.79
Trim56Q80VI1 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Gm43932-201ENSMUST00000204499 52 ntBASIC3.86□□□□□ -1.79
Trim56Q80VI1 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.86□□□□□ -1.79
Trim56Q80VI1 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trim56Q80VI1 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim56Q80VI1 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim56Q80VI1 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim56Q80VI1 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm26423-201ENSMUST00000104277 128 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm14073-201ENSMUST00000117344 381 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm12550-201ENSMUST00000118478 329 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm25494-201ENSMUST00000158143 100 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm22521-201ENSMUST00000158272 134 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm22532-201ENSMUST00000158822 140 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm27271-201ENSMUST00000183509 170 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm19901-201ENSMUST00000192191 495 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm37085-201ENSMUST00000193780 196 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm18433-202ENSMUST00000195682 196 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 AC124182.1-201ENSMUST00000227091 321 ntBASIC3.85□□□□□ -1.79
Trim56Q80VI1 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim56Q80VI1 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim56Q80VI1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
Trim56Q80VI1 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm23256-201ENSMUST00000102235 110 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm26140-201ENSMUST00000103807 110 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm24119-201ENSMUST00000103979 246 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm14973-201ENSMUST00000117248 255 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm12897-201ENSMUST00000120341 250 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm14215-201ENSMUST00000120578 221 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm15190-201ENSMUST00000120855 276 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm24716-201ENSMUST00000157524 104 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm22908-201ENSMUST00000177620 110 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm23966-201ENSMUST00000179823 107 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm17067-202ENSMUST00000180131 123 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm28314-201ENSMUST00000191276 345 ntBASIC3.84□□□□□ -1.79
Trim56Q80VI1 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms