Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm12550-201ENSMUST00000118478 329 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm15986-201ENSMUST00000122153 400 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm23232-201ENSMUST00000157300 105 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm23325-201ENSMUST00000157422 129 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm22316-201ENSMUST00000158012 216 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm24348-201ENSMUST00000158710 130 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm24799-201ENSMUST00000178431 79 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Mir6916-201ENSMUST00000184514 63 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm27997-201ENSMUST00000184942 69 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm43914-201ENSMUST00000203592 594 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm23055-201ENSMUST00000082805 94 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Mir32-201ENSMUST00000083610 70 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.82□□□□□ -1.96
Ubfd1Q78JW9 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm14894-201ENSMUST00000117170 270 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm12513-201ENSMUST00000118617 352 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm12646-201ENSMUST00000119144 238 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm12304-201ENSMUST00000120312 385 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm14919-201ENSMUST00000120839 390 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm13210-201ENSMUST00000121483 273 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm15065-201ENSMUST00000121699 273 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm25543-201ENSMUST00000122678 312 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm22141-201ENSMUST00000157403 277 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm27505-201ENSMUST00000185071 110 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm37449-201ENSMUST00000193016 270 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm18658-201ENSMUST00000195558 270 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm24316-201ENSMUST00000083041 107 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm24817-201ENSMUST00000093672 105 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.81□□□□□ -1.96
Ubfd1Q78JW9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Mir465b-1-201ENSMUST00000103940 79 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Mir465b-2-201ENSMUST00000104662 79 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm11854-201ENSMUST00000117839 446 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm11414-201ENSMUST00000121795 263 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm17166-201ENSMUST00000172006 431 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm21893-201ENSMUST00000179119 397 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm28744-201ENSMUST00000189939 340 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm37713-201ENSMUST00000191746 198 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm36946-201ENSMUST00000192706 435 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm37801-201ENSMUST00000194754 274 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm43978-201ENSMUST00000203491 451 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm45344-201ENSMUST00000211610 341 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Ubfd1Q78JW9 Gm15302-201ENSMUST00000117779 2630 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm24835-201ENSMUST00000116777 111 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm15010-201ENSMUST00000117153 407 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm13432-201ENSMUST00000118861 241 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm14770-201ENSMUST00000122197 312 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm23589-201ENSMUST00000157660 105 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm23581-201ENSMUST00000158531 63 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm23355-201ENSMUST00000177614 107 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm23148-201ENSMUST00000180367 107 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm27532-201ENSMUST00000183726 113 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm44223-201ENSMUST00000204854 114 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm44655-201ENSMUST00000207768 423 ntBASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Ubfd1Q78JW9 Gm10088-201ENSMUST00000074116 423 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms