Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm13756-201ENSMUST00000117618 222 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm16242-201ENSMUST00000117741 334 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm14269-201ENSMUST00000120455 306 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm12443-201ENSMUST00000122308 323 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm25321-201ENSMUST00000122558 102 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm26411-201ENSMUST00000157668 107 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm25486-201ENSMUST00000158726 63 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Snord53-201ENSMUST00000175146 78 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Mir6925-201ENSMUST00000197857 70 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm44811-201ENSMUST00000209120 228 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm18346-201ENSMUST00000216782 325 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm25130-201ENSMUST00000082650 156 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.24□□□□□ -2.05
Snrnp40Q6PE01 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm24049-201ENSMUST00000102409 100 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm23951-201ENSMUST00000104029 132 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Mdga2-203ENSMUST00000113942 423 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Snord98-201ENSMUST00000116819 65 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm13672-201ENSMUST00000117554 459 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm11859-201ENSMUST00000118099 455 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm23331-201ENSMUST00000157423 108 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm22535-201ENSMUST00000158174 119 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm7582-201ENSMUST00000160831 603 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm3027-201ENSMUST00000167579 451 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm24084-201ENSMUST00000175173 137 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm28740-201ENSMUST00000186142 215 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm37128-201ENSMUST00000192599 232 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm43393-201ENSMUST00000200147 194 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm43978-201ENSMUST00000203491 451 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm45375-201ENSMUST00000210338 280 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Snord68-201ENSMUST00000082516 86 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm23264-201ENSMUST00000083372 107 ntBASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
Snrnp40Q6PE01 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm13433-201ENSMUST00000121701 240 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm24504-201ENSMUST00000157679 100 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm23641-201ENSMUST00000157857 101 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm16111-201ENSMUST00000162128 285 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Mir6355-201ENSMUST00000183687 106 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm20257-202ENSMUST00000188643 130 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm43238-201ENSMUST00000196463 359 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm44353-201ENSMUST00000200618 138 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm25079-201ENSMUST00000082529 203 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm25651-201ENSMUST00000083782 119 ntBASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.22□□□□□ -2.05
Snrnp40Q6PE01 Gm26341-201ENSMUST00000104561 134 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Mir344e-201ENSMUST00000104677 66 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm25781-201ENSMUST00000122527 84 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm25054-201ENSMUST00000157370 97 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm23557-201ENSMUST00000157820 138 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm24771-201ENSMUST00000158508 137 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm20462-201ENSMUST00000172623 408 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Mir7226-201ENSMUST00000184953 60 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm28717-201ENSMUST00000189950 315 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Mir7215-201ENSMUST00000200383 51 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm44182-201ENSMUST00000204052 115 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm18991-201ENSMUST00000209225 746 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Snord104-201ENSMUST00000083192 70 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Gm23847-201ENSMUST00000083829 110 ntBASIC2.21□□□□□ -2.06
Snrnp40Q6PE01 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms