Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm15714-201ENSMUST00000117168 250 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm13801-201ENSMUST00000120750 160 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24141-201ENSMUST00000122776 115 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm25961-201ENSMUST00000157174 135 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm22225-201ENSMUST00000157358 278 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23123-201ENSMUST00000157648 144 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23865-201ENSMUST00000157723 97 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24727-201ENSMUST00000158231 144 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm25977-201ENSMUST00000158697 85 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm6625-201ENSMUST00000177870 272 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23736-201ENSMUST00000082553 75 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm10242-201ENSMUST00000090064 330 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24163-201ENSMUST00000093660 132 ntBASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
Sh3rf1Q69ZI1 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm9157-201ENSMUST00000117673 225 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm14215-201ENSMUST00000120578 221 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm26049-201ENSMUST00000157313 108 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm22316-201ENSMUST00000158012 216 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24926-201ENSMUST00000178053 79 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm22632-201ENSMUST00000178266 79 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm37343-201ENSMUST00000192542 111 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm38356-201ENSMUST00000194313 408 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm10172-201ENSMUST00000085929 558 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.68□□□□□ -1.82
Sh3rf1Q69ZI1 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm22779-201ENSMUST00000104085 107 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm14593-201ENSMUST00000119948 294 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm6079-201ENSMUST00000121356 404 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm14629-201ENSMUST00000122428 144 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm25269-201ENSMUST00000122601 104 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm22557-201ENSMUST00000157804 102 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm25369-201ENSMUST00000158848 132 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm17067-202ENSMUST00000180131 123 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm27189-201ENSMUST00000184119 190 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm33866-201ENSMUST00000196911 289 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm43199-201ENSMUST00000200019 307 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24626-201ENSMUST00000082621 161 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Snord14d-201ENSMUST00000083424 86 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.67□□□□□ -1.82
Sh3rf1Q69ZI1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24096-201ENSMUST00000103905 110 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24916-201ENSMUST00000157287 79 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24010-201ENSMUST00000157731 282 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm22967-201ENSMUST00000157956 239 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Snord92-201ENSMUST00000175548 85 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm28000-201ENSMUST00000184380 85 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm45245-201ENSMUST00000210082 376 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm45492-201ENSMUST00000211611 288 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 CT030645.1-201ENSMUST00000224020 231 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm24453-201ENSMUST00000083346 76 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm23947-201ENSMUST00000093636 107 ntBASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Sh3rf1Q69ZI1 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
Sh3rf1Q69ZI1 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Gm23337-201ENSMUST00000158959 118 ntBASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Gm45116-201ENSMUST00000207392 275 ntBASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Gm24147-201ENSMUST00000082763 144 ntBASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
Sh3rf1Q69ZI1 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 369.6 ms