Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm12793-201ENSMUST00000119268 292 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm22984-201ENSMUST00000122751 122 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm24291-201ENSMUST00000157633 162 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm24922-201ENSMUST00000158511 102 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Mir5136-201ENSMUST00000175573 76 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm25450-201ENSMUST00000179144 107 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm25473-201ENSMUST00000180191 107 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm27379-201ENSMUST00000183730 123 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Mir195b-201ENSMUST00000184814 97 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm9696-202ENSMUST00000191541 830 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm37089-201ENSMUST00000195616 129 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.63□□□□□ -1.83
Trim28Q62318 Gm43583-201ENSMUST00000199235 303 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm43284-201ENSMUST00000200103 253 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm44030-201ENSMUST00000204865 432 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC3.63□□□□□ -1.83
Trim28Q62318 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 AC165138.1-201ENSMUST00000226984 270 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Trim28Q62318 Gm9795-201ENSMUST00000062156 693 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Gm5899-201ENSMUST00000071770 270 ntBASIC3.63□□□□□ -1.83
Trim28Q62318 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Trim28Q62318 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Trim28Q62318 Gm12797-201ENSMUST00000118645 273 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 Gm11572-201ENSMUST00000119164 120 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 AA413626-201ENSMUST00000121125 494 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 Gm26287-201ENSMUST00000158887 81 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 Gm27476-201ENSMUST00000183366 104 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 Gm6651-201ENSMUST00000189471 271 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.62□□□□□ -1.83
Trim28Q62318 Gm44960-201ENSMUST00000207403 141 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC3.62□□□□□ -1.83
Trim28Q62318 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.62□□□□□ -1.83
Trim28Q62318 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim28Q62318 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.62□□□□□ -1.83
Trim28Q62318 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim28Q62318 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Trim28Q62318 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Trim28Q62318 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Trim28Q62318 Gm14803-201ENSMUST00000117163 361 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm6897-201ENSMUST00000117714 138 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm14758-201ENSMUST00000119104 138 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm22026-201ENSMUST00000122735 281 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm26022-201ENSMUST00000158663 108 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm27421-201ENSMUST00000184729 167 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC3.61□□□□□ -1.83
Trim28Q62318 Gm29597-201ENSMUST00000188035 308 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm43250-201ENSMUST00000196536 273 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm20144-201ENSMUST00000203031 165 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Gm44533-201ENSMUST00000207782 268 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.61□□□□□ -1.83
Trim28Q62318 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.61□□□□□ -1.83
Trim28Q62318 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Trim28Q62318 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Trim28Q62318 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim28Q62318 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Trim28Q62318 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Trim28Q62318 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.6□□□□□ -1.83
Trim28Q62318 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim28Q62318 Gm38071-201ENSMUST00000195792 3378 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm22784-201ENSMUST00000104088 132 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm22674-201ENSMUST00000104413 131 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm26247-201ENSMUST00000116702 91 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm15162-201ENSMUST00000119325 283 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm13581-201ENSMUST00000120675 278 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm26479-201ENSMUST00000122620 106 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm20542-201ENSMUST00000174582 372 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm27608-201ENSMUST00000184822 162 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.6□□□□□ -1.83
Trim28Q62318 Gm29330-201ENSMUST00000190032 699 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm44391-201ENSMUST00000198490 93 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 AC164297.3-201ENSMUST00000224238 94 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Gm22061-201ENSMUST00000082557 107 ntBASIC3.6□□□□□ -1.83
Trim28Q62318 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Trim28Q62318 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Trim28Q62318 Gm650-201ENSMUST00000144428 1551 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Trim28Q62318 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Trim28Q62318 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC3.59□□□□□ -1.83
Trim28Q62318 Mir6338-201ENSMUST00000183389 109 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 Mir6383-201ENSMUST00000184545 116 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 Mir376a-201ENSMUST00000197584 68 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 Gm6796-201ENSMUST00000211919 243 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 Mir452-201ENSMUST00000093629 85 ntBASIC3.59□□□□□ -1.83
Trim28Q62318 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
Trim28Q62318 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim28Q62318 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Trim28Q62318 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm24482-201ENSMUST00000117005 93 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm14119-201ENSMUST00000119511 235 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm15029-201ENSMUST00000119742 199 ntBASIC3.58□□□□□ -1.84
Trim28Q62318 Gm23232-201ENSMUST00000157300 105 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 136.3 ms