Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gm19326-201ENSMUST00000219818 326 ntBASIC0.07□□□□□ -2.4
Ubr3Q5U430 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
Ubr3Q5U430 Mir411-201ENSMUST00000083543 82 ntBASIC0.07□□□□□ -2.4
Ubr3Q5U430 Gm12449-201ENSMUST00000117572 234 ntBASIC0.07□□□□□ -2.4
Ubr3Q5U430 n-R5s187-201ENSMUST00000122769 111 ntBASIC0.07□□□□□ -2.4
Ubr3Q5U430 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.07□□□□□ -2.4
Ubr3Q5U430 Gm25393-201ENSMUST00000157336 285 ntBASIC0.07□□□□□ -2.4
Ubr3Q5U430 Mir7667-201ENSMUST00000183866 63 ntBASIC0.07□□□□□ -2.4
Ubr3Q5U430 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.07□□□□□ -2.4
Ubr3Q5U430 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.07□□□□□ -2.4
Ubr3Q5U430 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm24271-201ENSMUST00000102327 111 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm14362-201ENSMUST00000121679 273 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm15254-201ENSMUST00000149567 273 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm22942-201ENSMUST00000158563 124 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm29613-201ENSMUST00000185846 313 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm29544-201ENSMUST00000188860 313 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm28808-201ENSMUST00000190978 313 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm37869-201ENSMUST00000193385 595 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC0.06□□□□□ -2.4
Ubr3Q5U430 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.06□□□□□ -2.4
Ubr3Q5U430 Gm13246-201ENSMUST00000120994 315 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Gm16354-201ENSMUST00000155376 150 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.05□□□□□ -2.4
Ubr3Q5U430 AC114010.1-201ENSMUST00000222060 379 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 DQ267101-201ENSMUST00000082562 73 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Snord33-201ENSMUST00000083694 84 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Gm11904-201ENSMUST00000120562 248 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Gm24846-201ENSMUST00000158033 108 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Scarna8-201ENSMUST00000158333 131 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.05□□□□□ -2.4
Ubr3Q5U430 Gm25243-201ENSMUST00000174912 207 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 Gm29037-201ENSMUST00000189092 313 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC0.05□□□□□ -2.4
Ubr3Q5U430 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.05□□□□□ -2.4
Ubr3Q5U430 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
Ubr3Q5U430 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Ubr3Q5U430 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
Ubr3Q5U430 Gm12304-201ENSMUST00000120312 385 ntBASIC0.04□□□□□ -2.4
Ubr3Q5U430 Gm15309-201ENSMUST00000121644 240 ntBASIC0.04□□□□□ -2.4
Ubr3Q5U430 Gm14530-201ENSMUST00000122391 333 ntBASIC0.04□□□□□ -2.4
Ubr3Q5U430 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.04□□□□□ -2.4
Ubr3Q5U430 Gm25020-201ENSMUST00000178071 107 ntBASIC0.04□□□□□ -2.4
Ubr3Q5U430 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.04□□□□□ -2.4
Ubr3Q5U430 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.04□□□□□ -2.4
Ubr3Q5U430 Gm12392-201ENSMUST00000118014 938 ntBASIC0.03□□□□□ -2.4
Ubr3Q5U430 Gm11358-201ENSMUST00000122310 373 ntBASIC0.03□□□□□ -2.4
Ubr3Q5U430 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.03□□□□□ -2.4
Ubr3Q5U430 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
Ubr3Q5U430 Gm27420-201ENSMUST00000183823 79 ntBASIC0.03□□□□□ -2.4
Ubr3Q5U430 Gm45374-201ENSMUST00000211388 136 ntBASIC0.03□□□□□ -2.4
Ubr3Q5U430 AC126043.1-201ENSMUST00000221304 1141 ntBASIC0.03□□□□□ -2.4
Ubr3Q5U430 CT009733.1-203ENSMUST00000224033 451 ntBASIC0.03□□□□□ -2.4
Ubr3Q5U430 Gm25851-201ENSMUST00000082794 107 ntBASIC0.03□□□□□ -2.4
Ubr3Q5U430 Gm22368-201ENSMUST00000102416 109 ntBASIC0.03□□□□□ -2.41
Ubr3Q5U430 Gm11384-201ENSMUST00000121376 303 ntBASIC0.03□□□□□ -2.41
Ubr3Q5U430 Gm23633-201ENSMUST00000175293 119 ntBASIC0.03□□□□□ -2.41
Ubr3Q5U430 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.03□□□□□ -2.41
Ubr3Q5U430 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.03□□□□□ -2.41
Ubr3Q5U430 Gm18113-201ENSMUST00000220630 303 ntBASIC0.03□□□□□ -2.41
Ubr3Q5U430 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC0.02□□□□□ -2.41
Ubr3Q5U430 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.02□□□□□ -2.41
Ubr3Q5U430 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.02□□□□□ -2.41
Ubr3Q5U430 Gm45701-201ENSMUST00000212049 235 ntBASIC0.02□□□□□ -2.41
Ubr3Q5U430 Gm45907-201ENSMUST00000213023 193 ntBASIC0.02□□□□□ -2.41
Ubr3Q5U430 Mir6419-201ENSMUST00000184784 113 ntBASIC0.01□□□□□ -2.41
Ubr3Q5U430 Gm5329-201ENSMUST00000186898 463 ntBASIC0.01□□□□□ -2.41
Ubr3Q5U430 Gm45878-201ENSMUST00000211839 241 ntBASIC0.01□□□□□ -2.41
Ubr3Q5U430 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC0.01□□□□□ -2.41
Ubr3Q5U430 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
Ubr3Q5U430 Gm25802-201ENSMUST00000082639 77 ntBASIC0.01□□□□□ -2.41
Ubr3Q5U430 Gm34783-201ENSMUST00000209159 303 ntBASIC0.01□□□□□ -2.41
Ubr3Q5U430 Gm45438-201ENSMUST00000210242 564 ntBASIC0.01□□□□□ -2.41
Ubr3Q5U430 Gm24549-201ENSMUST00000158647 139 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC0□□□□□ -2.41
Ubr3Q5U430 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm28825-201ENSMUST00000186233 238 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm29011-201ENSMUST00000191059 712 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm37193-201ENSMUST00000193087 513 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm23370-202ENSMUST00000197008 129 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm43035-201ENSMUST00000197626 517 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm45658-201ENSMUST00000209197 580 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm45614-201ENSMUST00000209994 721 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm26327-201ENSMUST00000093724 111 ntBASIC0□□□□□ -2.41
Ubr3Q5U430 Gm13131-201ENSMUST00000122228 321 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 Gm22960-201ENSMUST00000122517 104 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 Gm28995-201ENSMUST00000186625 261 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 Gm43402-201ENSMUST00000197159 159 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 CT009733.1-201ENSMUST00000225322 425 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 AC170810.3-201ENSMUST00000226177 374 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 AC166344.2-201ENSMUST00000226747 374 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 AC122769.2-201ENSMUST00000227248 302 ntBASIC-0.01□□□□□ -2.41
Ubr3Q5U430 Gm25703-201ENSMUST00000083123 151 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms