Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm25788-201ENSMUST00000082721 131 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm26126-201ENSMUST00000083188 164 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.8□□□□□ -2.12
Upf3aQ3ULJ3 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm23766-201ENSMUST00000103894 80 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm25773-201ENSMUST00000116718 127 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm14392-201ENSMUST00000120332 401 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm14413-201ENSMUST00000122158 408 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm26278-201ENSMUST00000157098 132 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm23332-201ENSMUST00000157424 275 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm22665-201ENSMUST00000158720 275 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm24656-201ENSMUST00000177548 132 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm23523-201ENSMUST00000180190 107 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm27539-201ENSMUST00000184971 224 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm37361-201ENSMUST00000194345 132 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm18991-201ENSMUST00000209225 746 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm46312-201ENSMUST00000220961 420 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Ear14-201ENSMUST00000049559 468 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm22620-201ENSMUST00000082700 133 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Upf3aQ3ULJ3 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Defa-ps13-201ENSMUST00000120695 204 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Gm13409-201ENSMUST00000122072 546 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Gm23411-201ENSMUST00000157988 62 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Mir6379-201ENSMUST00000183392 115 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Gm27511-201ENSMUST00000183502 127 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Gm37337-201ENSMUST00000192601 993 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 AC167192.2-201ENSMUST00000224794 198 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Gm24151-201ENSMUST00000082758 141 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Gm23515-201ENSMUST00000082829 107 ntBASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC1.78□□□□□ -2.12
Upf3aQ3ULJ3 Gm15211-201ENSMUST00000118932 528 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm15443-201ENSMUST00000118947 820 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm12433-201ENSMUST00000119659 255 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm25888-201ENSMUST00000157778 302 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm23641-201ENSMUST00000157857 101 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm24902-201ENSMUST00000158126 123 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm25051-201ENSMUST00000158602 249 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Cfap61-214ENSMUST00000167179 183 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm24572-201ENSMUST00000175505 88 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm19932-201ENSMUST00000177033 313 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm18588-201ENSMUST00000177308 492 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm27624-201ENSMUST00000185047 177 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm28058-201ENSMUST00000186421 264 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm9227-201ENSMUST00000194733 566 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm43510-201ENSMUST00000197922 353 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm8125-201ENSMUST00000216602 738 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm23246-201ENSMUST00000083371 67 ntBASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Upf3aQ3ULJ3 Gm15067-201ENSMUST00000119534 156 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 U6.1-201ENSMUST00000157443 101 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm26181-201ENSMUST00000157687 106 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm25162-201ENSMUST00000158906 159 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm23967-201ENSMUST00000175062 78 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm23267-201ENSMUST00000178490 132 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm9402-201ENSMUST00000196849 388 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.76□□□□□ -2.13
Upf3aQ3ULJ3 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Upf3aQ3ULJ3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.75□□□□□ -2.13
Upf3aQ3ULJ3 Gm13378-201ENSMUST00000117483 336 ntBASIC1.75□□□□□ -2.13
Upf3aQ3ULJ3 Gm14774-201ENSMUST00000117857 536 ntBASIC1.75□□□□□ -2.13
Upf3aQ3ULJ3 Gm14709-201ENSMUST00000121225 304 ntBASIC1.75□□□□□ -2.13
Upf3aQ3ULJ3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.75□□□□□ -2.13
Upf3aQ3ULJ3 Gm23829-201ENSMUST00000157392 270 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms