Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.61□□□□□ -1.83
Rnf180Q3U827 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.61□□□□□ -1.83
Rnf180Q3U827 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.61□□□□□ -1.83
Rnf180Q3U827 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.61□□□□□ -1.83
Rnf180Q3U827 Gm22358-201ENSMUST00000082877 122 ntBASIC3.61□□□□□ -1.83
Rnf180Q3U827 Gm23847-201ENSMUST00000083829 110 ntBASIC3.61□□□□□ -1.83
Rnf180Q3U827 Gm25188-201ENSMUST00000083913 122 ntBASIC3.61□□□□□ -1.83
Rnf180Q3U827 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Rnf180Q3U827 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.61□□□□□ -1.83
Rnf180Q3U827 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rnf180Q3U827 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm11572-201ENSMUST00000119164 120 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm5937-201ENSMUST00000119715 643 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm12723-201ENSMUST00000120700 451 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm14768-201ENSMUST00000122126 678 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm23713-201ENSMUST00000157353 70 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm22615-201ENSMUST00000158102 70 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm23474-201ENSMUST00000158884 75 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm23355-201ENSMUST00000177614 107 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm23148-201ENSMUST00000180367 107 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Mir6481-201ENSMUST00000184617 110 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm37417-201ENSMUST00000195257 454 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 Gm25258-201ENSMUST00000083049 107 ntBASIC3.6□□□□□ -1.83
Rnf180Q3U827 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rnf180Q3U827 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rnf180Q3U827 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Rnf180Q3U827 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Mir466k-201ENSMUST00000116774 122 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm24210-201ENSMUST00000158263 133 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm42672-201ENSMUST00000197821 352 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm44977-201ENSMUST00000205283 420 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 AC155715.1-201ENSMUST00000213575 463 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rnf180Q3U827 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm23723-201ENSMUST00000082996 132 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm25896-201ENSMUST00000083713 136 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.59□□□□□ -1.83
Rnf180Q3U827 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.59□□□□□ -1.83
Rnf180Q3U827 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
Rnf180Q3U827 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Rnf180Q3U827 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Rnf180Q3U827 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Rnf180Q3U827 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.58□□□□□ -1.84
Rnf180Q3U827 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm24436-201ENSMUST00000157889 302 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm24879-201ENSMUST00000158386 143 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm6660-201ENSMUST00000179149 468 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm27445-201ENSMUST00000184484 72 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Mir3535-201ENSMUST00000197651 147 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 AC167721.1-201ENSMUST00000217088 279 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm22620-201ENSMUST00000082700 133 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm22622-201ENSMUST00000082870 129 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.58□□□□□ -1.84
Rnf180Q3U827 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Rnf180Q3U827 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Rnf180Q3U827 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.57□□□□□ -1.84
Rnf180Q3U827 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Rnf180Q3U827 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm13355-201ENSMUST00000117996 317 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm22447-201ENSMUST00000158155 92 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm24818-201ENSMUST00000175093 161 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm28744-201ENSMUST00000189939 340 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm37763-201ENSMUST00000193445 120 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm30674-201ENSMUST00000214523 392 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC3.57□□□□□ -1.84
Rnf180Q3U827 Gm9174-201ENSMUST00000078149 255 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 Mir32-201ENSMUST00000083610 70 ntBASIC3.57□□□□□ -1.84
Rnf180Q3U827 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Rnf180Q3U827 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm44114-201ENSMUST00000203270 2727 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Rnf180Q3U827 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm13729-201ENSMUST00000120328 406 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm16327-201ENSMUST00000137146 228 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm28921-201ENSMUST00000190219 378 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm37281-201ENSMUST00000192412 439 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm37746-201ENSMUST00000193249 198 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm45879-201ENSMUST00000212521 392 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm25078-201ENSMUST00000082530 107 ntBASIC3.56□□□□□ -1.84
Rnf180Q3U827 Gm25401-201ENSMUST00000082975 106 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms