Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm8219-201ENSMUST00000218309 242 ntBASIC4.38□□□□□ -1.71
Rnf40Q3U319 Gm7665-201ENSMUST00000076710 297 ntBASIC4.38□□□□□ -1.71
Rnf40Q3U319 Gm25630-201ENSMUST00000084000 162 ntBASIC4.38□□□□□ -1.71
Rnf40Q3U319 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf40Q3U319 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf40Q3U319 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Rnf40Q3U319 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf40Q3U319 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Rnf40Q3U319 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Rnf40Q3U319 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf40Q3U319 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf40Q3U319 Gm26387-201ENSMUST00000104238 132 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Gm25107-201ENSMUST00000122472 129 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Gm22790-201ENSMUST00000157229 129 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Gm22729-201ENSMUST00000158088 129 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Gm23895-201ENSMUST00000158108 160 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Gm22516-201ENSMUST00000158266 124 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Mir6963-201ENSMUST00000183535 71 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Gm22868-201ENSMUST00000083955 164 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
Rnf40Q3U319 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf40Q3U319 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf40Q3U319 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.37□□□□□ -1.71
Rnf40Q3U319 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Rnf40Q3U319 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Rnf40Q3U319 Olfr109-204ENSMUST00000217602 5437 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Rnf40Q3U319 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm23948-201ENSMUST00000104030 132 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm25272-201ENSMUST00000104293 128 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm23202-201ENSMUST00000104376 129 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm22498-201ENSMUST00000104497 86 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm14973-201ENSMUST00000117248 255 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm13913-201ENSMUST00000121126 260 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm23231-201ENSMUST00000157299 104 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm23112-201ENSMUST00000158606 125 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Mir3083-201ENSMUST00000175377 64 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Mir7039-201ENSMUST00000183852 85 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm27551-201ENSMUST00000184258 77 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC4.36□□□□□ -1.71
Rnf40Q3U319 Ighv1-1-201ENSMUST00000194912 291 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm42451-201ENSMUST00000197410 244 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm46233-201ENSMUST00000217831 449 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 AC183096.2-201ENSMUST00000228733 457 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Mir17-201ENSMUST00000083574 84 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm26168-201ENSMUST00000083787 112 ntBASIC4.36□□□□□ -1.71
Rnf40Q3U319 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Rnf40Q3U319 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Rnf40Q3U319 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
Rnf40Q3U319 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Rnf40Q3U319 Mir92b-201ENSMUST00000102300 83 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm23879-201ENSMUST00000116874 126 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm22277-201ENSMUST00000157204 277 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm24718-201ENSMUST00000157521 136 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm23546-201ENSMUST00000158211 137 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm22521-201ENSMUST00000158272 134 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm25198-201ENSMUST00000178574 110 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm27792-201ENSMUST00000184031 115 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm6060-201ENSMUST00000188671 251 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Ighv1-28-201ENSMUST00000192987 351 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm22454-201ENSMUST00000082583 107 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Rnf40Q3U319 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm37011-201ENSMUST00000195543 2935 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.35□□□□□ -1.71
Rnf40Q3U319 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Rnf40Q3U319 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Rnf40Q3U319 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf40Q3U319 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm25537-201ENSMUST00000103851 109 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm14816-201ENSMUST00000117174 294 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm24601-201ENSMUST00000157970 143 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm23665-201ENSMUST00000158054 62 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm21064-202ENSMUST00000190583 278 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm36964-201ENSMUST00000191876 198 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm17775-201ENSMUST00000198542 258 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm43217-201ENSMUST00000199513 367 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm22738-201ENSMUST00000083440 147 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Gm10242-201ENSMUST00000090064 330 ntBASIC4.34□□□□□ -1.71
Rnf40Q3U319 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Rnf40Q3U319 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Rnf40Q3U319 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Rnf40Q3U319 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Rnf40Q3U319 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.33□□□□□ -1.72
Rnf40Q3U319 Gm13852-201ENSMUST00000122350 242 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms