Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm19123-201ENSMUST00000190716 651 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm37162-201ENSMUST00000191708 551 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm42647-201ENSMUST00000195939 459 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm30534-201ENSMUST00000217928 207 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Gm9795-201ENSMUST00000062156 693 ntBASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Col28a1Q2UY11 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm26500-201ENSMUST00000101867 106 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm15162-201ENSMUST00000119325 283 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm6574-201ENSMUST00000120037 362 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm11456-201ENSMUST00000121070 256 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm22984-201ENSMUST00000122751 122 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm22381-201ENSMUST00000158186 107 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm2962-201ENSMUST00000159266 336 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm24264-201ENSMUST00000179835 94 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm7909-201ENSMUST00000182688 614 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm27540-201ENSMUST00000184950 187 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm24350-202ENSMUST00000198309 132 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm42578-201ENSMUST00000199960 194 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm43955-201ENSMUST00000204332 142 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm44399-201ENSMUST00000205043 226 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.79□□□□□ -1.96
Col28a1Q2UY11 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm25078-201ENSMUST00000082530 107 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Mir471-201ENSMUST00000093596 67 ntBASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Col28a1Q2UY11 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Mir499-201ENSMUST00000102357 79 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Mir294-201ENSMUST00000104710 84 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm9009-201ENSMUST00000117321 326 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm16032-201ENSMUST00000118534 168 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm13541-201ENSMUST00000119519 283 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm26414-201ENSMUST00000157674 269 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm24958-201ENSMUST00000158009 97 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm24552-201ENSMUST00000158646 103 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm24885-201ENSMUST00000158783 270 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Mir3965-201ENSMUST00000175570 69 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm17522-201ENSMUST00000178144 498 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm25198-201ENSMUST00000178574 110 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm27330-201ENSMUST00000184689 132 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm44533-201ENSMUST00000207782 268 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm25698-201ENSMUST00000082897 107 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Mir32-201ENSMUST00000083610 70 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Col28a1Q2UY11 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
Col28a1Q2UY11 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.78□□□□□ -1.97
Col28a1Q2UY11 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm24121-201ENSMUST00000102029 106 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm13714-201ENSMUST00000117313 221 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm14518-201ENSMUST00000117351 542 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm13581-201ENSMUST00000120675 278 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm14562-201ENSMUST00000129885 543 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm26279-201ENSMUST00000157095 102 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm22337-201ENSMUST00000157721 132 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Mir8103-201ENSMUST00000183945 107 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm28453-203ENSMUST00000187041 189 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm28849-201ENSMUST00000188127 174 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm28330-201ENSMUST00000190353 171 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm43239-201ENSMUST00000200131 201 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm32222-201ENSMUST00000203296 298 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm44010-201ENSMUST00000204432 331 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Col28a1Q2UY11 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms