Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Mir376a-201ENSMUST00000197584 68 ntBASIC3.43□□□□□ -1.86
Sox9Q04887 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Sox9Q04887 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.43□□□□□ -1.86
Sox9Q04887 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Sox9Q04887 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Sox9Q04887 Gm22294-201ENSMUST00000083308 104 ntBASIC3.43□□□□□ -1.86
Sox9Q04887 Gm10242-201ENSMUST00000090064 330 ntBASIC3.43□□□□□ -1.86
Sox9Q04887 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.43□□□□□ -1.86
Sox9Q04887 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Sox9Q04887 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Sox9Q04887 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sox9Q04887 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
Sox9Q04887 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.42□□□□□ -1.86
Sox9Q04887 Cox20-ps-201ENSMUST00000119872 353 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm12721-201ENSMUST00000120621 268 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm25270-201ENSMUST00000122606 138 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.42□□□□□ -1.86
Sox9Q04887 Gm25454-201ENSMUST00000157947 315 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm23257-201ENSMUST00000158322 132 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm24358-201ENSMUST00000158424 288 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm20542-201ENSMUST00000174582 372 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm25235-201ENSMUST00000179933 107 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.42□□□□□ -1.86
Sox9Q04887 Gm29014-201ENSMUST00000191422 326 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm43680-201ENSMUST00000199466 340 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC3.42□□□□□ -1.86
Sox9Q04887 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm45687-201ENSMUST00000209454 155 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.42□□□□□ -1.86
Sox9Q04887 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Sox9Q04887 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sox9Q04887 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Sox9Q04887 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Sox9Q04887 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Sox9Q04887 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sox9Q04887 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sox9Q04887 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sox9Q04887 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.41□□□□□ -1.86
Sox9Q04887 Mir291a-201ENSMUST00000104815 82 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Gm15846-201ENSMUST00000116022 320 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Gm22145-201ENSMUST00000157396 148 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Gm22315-201ENSMUST00000158010 143 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Mir6402-201ENSMUST00000183406 80 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.41□□□□□ -1.86
Sox9Q04887 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Sox9Q04887 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Gm22979-201ENSMUST00000082609 159 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Sox9Q04887 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.41□□□□□ -1.86
Sox9Q04887 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Sox9Q04887 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Sox9Q04887 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.4□□□□□ -1.86
Sox9Q04887 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Sox9Q04887 Mir872-201ENSMUST00000104728 81 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sox9Q04887 Gm13761-201ENSMUST00000117238 807 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm22027-201ENSMUST00000122737 127 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm25664-201ENSMUST00000157697 107 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm22842-201ENSMUST00000157709 118 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm23592-201ENSMUST00000157859 117 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm2962-201ENSMUST00000159266 336 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sox9Q04887 Gm17117-201ENSMUST00000163665 299 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sox9Q04887 Gm19123-201ENSMUST00000190716 651 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm30341-201ENSMUST00000194363 289 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.4□□□□□ -1.87
Sox9Q04887 Gm43901-201ENSMUST00000203247 453 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Gm23727-201ENSMUST00000083352 164 ntBASIC3.4□□□□□ -1.87
Sox9Q04887 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sox9Q04887 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.4□□□□□ -1.87
Sox9Q04887 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Sox9Q04887 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sox9Q04887 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Sox9Q04887 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sox9Q04887 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sox9Q04887 Gm11356-201ENSMUST00000118974 192 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm25543-201ENSMUST00000122678 312 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm22321-201ENSMUST00000157152 104 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm22722-201ENSMUST00000157467 132 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm22833-201ENSMUST00000158292 132 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.39□□□□□ -1.87
Sox9Q04887 Gm5329-201ENSMUST00000186898 463 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm28453-203ENSMUST00000187041 189 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 AC155839.1-201ENSMUST00000200105 147 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.39□□□□□ -1.87
Sox9Q04887 Gm44533-201ENSMUST00000207782 268 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Gm24356-201ENSMUST00000082859 106 ntBASIC3.39□□□□□ -1.87
Sox9Q04887 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sox9Q04887 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Sox9Q04887 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sox9Q04887 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sox9Q04887 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms