Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm26337-201ENSMUST00000178000 79 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm38238-201ENSMUST00000194334 346 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm42774-201ENSMUST00000198854 283 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm43155-201ENSMUST00000202661 494 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a1Q04857 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.91□□□□□ -1.78
Col6a1Q04857 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm25204-201ENSMUST00000082843 106 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm25581-201ENSMUST00000083410 164 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.91□□□□□ -1.78
Col6a1Q04857 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a1Q04857 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col6a1Q04857 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.9□□□□□ -1.78
Col6a1Q04857 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col6a1Q04857 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Col6a1Q04857 Gm14593-201ENSMUST00000119948 294 ntBASIC3.9□□□□□ -1.79
Col6a1Q04857 Gm24936-201ENSMUST00000122598 247 ntBASIC3.9□□□□□ -1.79
Col6a1Q04857 Gm44320-201ENSMUST00000199276 86 ntBASIC3.9□□□□□ -1.79
Col6a1Q04857 Gm44563-201ENSMUST00000207958 178 ntBASIC3.9□□□□□ -1.79
Col6a1Q04857 Mir146-201ENSMUST00000083667 65 ntBASIC3.9□□□□□ -1.79
Col6a1Q04857 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.9□□□□□ -1.79
Col6a1Q04857 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Col6a1Q04857 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Col6a1Q04857 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.9□□□□□ -1.79
Col6a1Q04857 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Col6a1Q04857 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Col6a1Q04857 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Col6a1Q04857 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a1Q04857 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Col6a1Q04857 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm15466-201ENSMUST00000122299 333 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm8840-201ENSMUST00000122454 386 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm26022-201ENSMUST00000158663 108 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm23922-201ENSMUST00000178792 79 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm24657-201ENSMUST00000180085 79 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm22996-201ENSMUST00000180236 79 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm27220-201ENSMUST00000183453 262 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm27374-201ENSMUST00000183660 81 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm28282-201ENSMUST00000186072 186 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm44343-201ENSMUST00000196702 90 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm24705-201ENSMUST00000082808 107 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm23039-201ENSMUST00000083870 161 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 Gm24164-201ENSMUST00000093663 104 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 AC125223.3-201ENSMUST00000223588 2067 ntBASIC3.89□□□□□ -1.79
Col6a1Q04857 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col6a1Q04857 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
Col6a1Q04857 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col6a1Q04857 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a1Q04857 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm22779-201ENSMUST00000104085 107 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm14073-201ENSMUST00000117344 381 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm11471-201ENSMUST00000121824 198 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm24086-201ENSMUST00000175171 98 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm18991-201ENSMUST00000209225 746 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm35405-201ENSMUST00000218754 400 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Gm10360-201ENSMUST00000097219 272 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Col6a1Q04857 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.88□□□□□ -1.79
Col6a1Q04857 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a1Q04857 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
Col6a1Q04857 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Col6a1Q04857 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
Col6a1Q04857 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Col6a1Q04857 Mir1b-201ENSMUST00000117012 122 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a1Q04857 Mir3092-201ENSMUST00000174954 96 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm23053-201ENSMUST00000175136 96 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Mir5136-201ENSMUST00000175573 76 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm28000-201ENSMUST00000184380 85 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm37698-201ENSMUST00000192605 463 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm37085-201ENSMUST00000193780 196 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm23722-201ENSMUST00000083002 130 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Snora31-201ENSMUST00000083213 130 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.87□□□□□ -1.79
Col6a1Q04857 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Col6a1Q04857 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Col6a1Q04857 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Col6a1Q04857 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Col6a1Q04857 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Col6a1Q04857 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Col6a1Q04857 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm14629-201ENSMUST00000122428 144 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm26100-201ENSMUST00000157245 127 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm23713-201ENSMUST00000157353 70 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm22615-201ENSMUST00000158102 70 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm26214-201ENSMUST00000158581 107 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm16404-201ENSMUST00000177739 468 ntBASIC3.86□□□□□ -1.79
Col6a1Q04857 Gm6660-201ENSMUST00000179149 468 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms