Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Msx2Q03358 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Msx2Q03358 Gm24276-201ENSMUST00000102181 110 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm14020-201ENSMUST00000118165 662 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm5963-201ENSMUST00000143451 236 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm26482-201ENSMUST00000158015 62 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm25224-201ENSMUST00000158195 68 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC3.39□□□□□ -1.87
Msx2Q03358 Gm27903-201ENSMUST00000175482 126 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm25020-201ENSMUST00000178071 107 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Mir6345-201ENSMUST00000184286 128 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm28825-201ENSMUST00000186233 238 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm37698-201ENSMUST00000192605 463 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.39□□□□□ -1.87
Msx2Q03358 Gm37290-201ENSMUST00000195775 339 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Gm44429-201ENSMUST00000203542 186 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.39□□□□□ -1.87
Msx2Q03358 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Msx2Q03358 Gm24355-201ENSMUST00000082858 122 ntBASIC3.39□□□□□ -1.87
Msx2Q03358 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Msx2Q03358 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Msx2Q03358 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Msx2Q03358 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Msx2Q03358 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Msx2Q03358 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.39□□□□□ -1.87
Msx2Q03358 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Msx2Q03358 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Msx2Q03358 Gm22148-201ENSMUST00000104445 107 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Gm22373-201ENSMUST00000104584 89 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Gm22967-201ENSMUST00000157956 239 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Gm24503-201ENSMUST00000158454 135 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Gm7449-201ENSMUST00000194393 663 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Gm43199-201ENSMUST00000200019 307 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Gm44650-201ENSMUST00000206929 194 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.38□□□□□ -1.87
Msx2Q03358 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Msx2Q03358 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Msx2Q03358 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.37□□□□□ -1.87
Msx2Q03358 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Msx2Q03358 Gm24234-201ENSMUST00000104316 107 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm13922-201ENSMUST00000119505 156 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.37□□□□□ -1.87
Msx2Q03358 Gm22557-201ENSMUST00000157804 102 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm23337-201ENSMUST00000158959 118 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Msx2Q03358 Gm28010-201ENSMUST00000179485 126 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Mir6914-201ENSMUST00000184999 69 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm44352-201ENSMUST00000196358 110 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm44294-201ENSMUST00000205090 728 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm45116-201ENSMUST00000207392 275 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm5548-201ENSMUST00000055878 397 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm10298-201ENSMUST00000074801 265 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm23850-201ENSMUST00000083830 169 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm24449-201ENSMUST00000083985 106 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.37□□□□□ -1.87
Msx2Q03358 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Msx2Q03358 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Msx2Q03358 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Msx2Q03358 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Msx2Q03358 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Msx2Q03358 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msx2Q03358 Gm26145-201ENSMUST00000104476 127 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm14299-201ENSMUST00000117586 397 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm13567-201ENSMUST00000118026 247 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm16250-201ENSMUST00000148974 256 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm23260-201ENSMUST00000158317 172 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.36□□□□□ -1.87
Msx2Q03358 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msx2Q03358 Gm22120-201ENSMUST00000175590 70 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm22775-201ENSMUST00000177630 120 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm23569-201ENSMUST00000180120 120 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Msx2Q03358 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.36□□□□□ -1.87
Msx2Q03358 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm8508-201ENSMUST00000061226 363 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm25136-201ENSMUST00000083253 115 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Mir137-201ENSMUST00000083635 73 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Gm10242-201ENSMUST00000090064 330 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.36□□□□□ -1.87
Msx2Q03358 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.36□□□□□ -1.87
Msx2Q03358 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Msx2Q03358 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Msx2Q03358 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Msx2Q03358 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Msx2Q03358 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Msx2Q03358 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Msx2Q03358 Gm24281-201ENSMUST00000104234 136 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Gm23320-201ENSMUST00000104462 127 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Gm16005-201ENSMUST00000120515 269 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Gm24141-201ENSMUST00000122776 115 ntBASIC3.35□□□□□ -1.87
Msx2Q03358 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.35□□□□□ -1.87
Msx2Q03358 Gm22034-201ENSMUST00000157283 134 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms