Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.47□□□□□ -2.01
NcanP55066 CT485612.4-201ENSMUST00000223405 250 ntBASIC2.47□□□□□ -2.01
NcanP55066 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
NcanP55066 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
NcanP55066 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm22032-201ENSMUST00000116946 116 ntBASIC2.46□□□□□ -2.02
NcanP55066 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm13876-201ENSMUST00000118451 261 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm25339-201ENSMUST00000157458 232 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm24191-201ENSMUST00000157977 122 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm23191-201ENSMUST00000179147 107 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm15235-201ENSMUST00000200572 194 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm44446-201ENSMUST00000204864 255 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm17990-201ENSMUST00000211728 553 ntBASIC2.46□□□□□ -2.02
NcanP55066 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.46□□□□□ -2.02
NcanP55066 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.46□□□□□ -2.02
NcanP55066 Gm23404-201ENSMUST00000082543 97 ntBASIC2.46□□□□□ -2.02
NcanP55066 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
NcanP55066 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
NcanP55066 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NcanP55066 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NcanP55066 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
NcanP55066 Gm12155-201ENSMUST00000121267 160 ntBASIC2.45□□□□□ -2.02
NcanP55066 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NcanP55066 Gm23169-201ENSMUST00000157157 112 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm22228-201ENSMUST00000157364 101 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm26149-201ENSMUST00000157432 108 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm27905-201ENSMUST00000184005 207 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
NcanP55066 Gm43723-201ENSMUST00000196886 189 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm43472-201ENSMUST00000200175 154 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm44524-201ENSMUST00000203899 271 ntBASIC2.45□□□□□ -2.02
NcanP55066 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.45□□□□□ -2.02
NcanP55066 Gm45730-201ENSMUST00000212560 395 ntBASIC2.45□□□□□ -2.02
NcanP55066 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.45□□□□□ -2.02
NcanP55066 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.45□□□□□ -2.02
NcanP55066 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm23378-201ENSMUST00000082942 107 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm23727-201ENSMUST00000083352 164 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm22365-201ENSMUST00000093750 117 ntBASIC2.45□□□□□ -2.02
NcanP55066 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.45□□□□□ -2.02
NcanP55066 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
NcanP55066 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NcanP55066 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
NcanP55066 Gm26080-201ENSMUST00000104069 131 ntBASIC2.44□□□□□ -2.02
NcanP55066 Mir669i-201ENSMUST00000117007 127 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm13355-201ENSMUST00000117996 317 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm12876-201ENSMUST00000120975 408 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24596-201ENSMUST00000122504 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23184-201ENSMUST00000122594 131 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23586-201ENSMUST00000157657 123 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24584-201ENSMUST00000157972 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24737-201ENSMUST00000158861 100 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25211-201ENSMUST00000177553 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23151-201ENSMUST00000178061 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25245-201ENSMUST00000178139 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm26245-201ENSMUST00000178491 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23610-201ENSMUST00000178659 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25312-201ENSMUST00000178972 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25101-201ENSMUST00000179057 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm26378-201ENSMUST00000179093 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23712-201ENSMUST00000179713 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25173-201ENSMUST00000179794 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24870-201ENSMUST00000179897 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm22645-201ENSMUST00000180010 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24565-201ENSMUST00000180099 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23805-201ENSMUST00000180129 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25327-201ENSMUST00000180263 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm22418-201ENSMUST00000180326 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm27330-201ENSMUST00000184689 132 ntBASIC2.44□□□□□ -2.02
NcanP55066 Mir195b-201ENSMUST00000184814 97 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm28825-201ENSMUST00000186233 238 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm43284-201ENSMUST00000200103 253 ntBASIC2.44□□□□□ -2.02
NcanP55066 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.44□□□□□ -2.02
NcanP55066 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.44□□□□□ -2.02
NcanP55066 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.44□□□□□ -2.02
NcanP55066 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm10298-201ENSMUST00000074801 265 ntBASIC2.44□□□□□ -2.02
NcanP55066 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NcanP55066 Gm23629-201ENSMUST00000082465 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23924-201ENSMUST00000082474 108 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm22749-201ENSMUST00000082490 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm22747-201ENSMUST00000082495 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm22063-201ENSMUST00000082560 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23057-201ENSMUST00000082801 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm26328-201ENSMUST00000082821 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23517-201ENSMUST00000082830 192 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm26324-201ENSMUST00000083073 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24535-201ENSMUST00000083140 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm26127-201ENSMUST00000083193 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24456-201ENSMUST00000083198 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24018-201ENSMUST00000083232 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25794-201ENSMUST00000083286 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25577-201ENSMUST00000083414 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm24861-201ENSMUST00000083459 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23103-201ENSMUST00000083725 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm23732-201ENSMUST00000083751 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm25512-201ENSMUST00000083863 107 ntBASIC2.44□□□□□ -2.02
NcanP55066 Gm22352-201ENSMUST00000083917 107 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms