Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm22891-201ENSMUST00000158641 164 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Gm25162-201ENSMUST00000158906 159 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.89□□□□□ -2.11
Sox3P53784 Gm25996-201ENSMUST00000175393 117 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Gm23523-201ENSMUST00000180190 107 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Gm27236-201ENSMUST00000184147 442 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Sox3P53784 Gm37119-201ENSMUST00000195691 389 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Mir7215-201ENSMUST00000200383 51 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Gm44446-201ENSMUST00000204864 255 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.89□□□□□ -2.11
Sox3P53784 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.89□□□□□ -2.11
Sox3P53784 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.89□□□□□ -2.11
Sox3P53784 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.89□□□□□ -2.11
Sox3P53784 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.89□□□□□ -2.11
Sox3P53784 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Sox3P53784 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Sox3P53784 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.89□□□□□ -2.11
Sox3P53784 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Sox3P53784 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm22834-201ENSMUST00000102021 79 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm22673-201ENSMUST00000104415 131 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Mir743b-201ENSMUST00000104751 77 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm13672-201ENSMUST00000117554 459 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm16328-201ENSMUST00000126985 196 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm23000-201ENSMUST00000157083 139 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm26278-201ENSMUST00000157098 132 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Mir28b-201ENSMUST00000175399 80 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Mir7679-201ENSMUST00000183379 63 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Mir6355-201ENSMUST00000183687 106 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm27624-201ENSMUST00000185047 177 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm5034-201ENSMUST00000199115 634 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm44182-201ENSMUST00000204052 115 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Gm5001-201ENSMUST00000204361 331 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.88□□□□□ -2.11
Sox3P53784 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.88□□□□□ -2.11
Sox3P53784 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Sox3P53784 Gm22866-201ENSMUST00000083947 177 ntBASIC1.88□□□□□ -2.11
Sox3P53784 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Sox3P53784 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
Sox3P53784 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Sox3P53784 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Sox3P53784 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Sox3P53784 Gm25274-201ENSMUST00000104296 135 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm12770-201ENSMUST00000121734 462 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm22199-201ENSMUST00000122660 126 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm23469-201ENSMUST00000157131 104 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm26149-201ENSMUST00000157432 108 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm25012-201ENSMUST00000158396 164 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Sox3P53784 Gm27539-201ENSMUST00000184971 224 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Mir6376-201ENSMUST00000185149 131 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm28740-201ENSMUST00000186142 215 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.87□□□□□ -2.11
Sox3P53784 Gm44938-201ENSMUST00000208614 427 ntBASIC1.87□□□□□ -2.11
Sox3P53784 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm6109-201ENSMUST00000223297 348 ntBASIC1.87□□□□□ -2.11
Sox3P53784 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Gm24044-201ENSMUST00000083107 156 ntBASIC1.87□□□□□ -2.11
Sox3P53784 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Sox3P53784 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Sox3P53784 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.86□□□□□ -2.11
Sox3P53784 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Sox3P53784 Gm22656-201ENSMUST00000104199 171 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm14364-201ENSMUST00000129209 267 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.86□□□□□ -2.11
Sox3P53784 Gm23381-201ENSMUST00000157676 94 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm22555-201ENSMUST00000157801 62 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm25384-201ENSMUST00000157807 105 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm23411-201ENSMUST00000157988 62 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Cfap61-214ENSMUST00000167179 183 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm23813-201ENSMUST00000175153 77 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm28794-201ENSMUST00000185276 136 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm28489-201ENSMUST00000186655 316 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm44881-201ENSMUST00000205425 367 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.86□□□□□ -2.11
Sox3P53784 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.86□□□□□ -2.11
Sox3P53784 Gm45730-201ENSMUST00000212560 395 ntBASIC1.86□□□□□ -2.11
Sox3P53784 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm46993-201ENSMUST00000220708 259 ntBASIC1.86□□□□□ -2.11
Sox3P53784 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.86□□□□□ -2.11
Sox3P53784 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Sox3P53784 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.86□□□□□ -2.11
Sox3P53784 Gm26080-201ENSMUST00000104069 131 ntBASIC1.85□□□□□ -2.11
Sox3P53784 Gm11386-201ENSMUST00000117761 347 ntBASIC1.85□□□□□ -2.11
Sox3P53784 Gm24481-201ENSMUST00000157210 102 ntBASIC1.85□□□□□ -2.11
Sox3P53784 Gm25054-201ENSMUST00000157370 97 ntBASIC1.85□□□□□ -2.11
Sox3P53784 Gm23331-201ENSMUST00000157423 108 ntBASIC1.85□□□□□ -2.11
Sox3P53784 Gm22554-201ENSMUST00000157798 147 ntBASIC1.85□□□□□ -2.11
Sox3P53784 Gm24191-201ENSMUST00000157977 122 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms