Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm25856-201ENSMUST00000082786 75 ntBASIC3.42□□□□□ -1.86
Usp4P35123 Gm24204-201ENSMUST00000082950 107 ntBASIC3.42□□□□□ -1.86
Usp4P35123 Gm23136-201ENSMUST00000083425 99 ntBASIC3.42□□□□□ -1.86
Usp4P35123 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
Usp4P35123 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Usp4P35123 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.42□□□□□ -1.86
Usp4P35123 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.42□□□□□ -1.86
Usp4P35123 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Usp4P35123 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp4P35123 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Usp4P35123 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp4P35123 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp4P35123 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.41□□□□□ -1.86
Usp4P35123 Gm25834-201ENSMUST00000158916 101 ntBASIC3.41□□□□□ -1.86
Usp4P35123 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp4P35123 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp4P35123 Gm5329-201ENSMUST00000186898 463 ntBASIC3.41□□□□□ -1.86
Usp4P35123 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.41□□□□□ -1.86
Usp4P35123 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.41□□□□□ -1.86
Usp4P35123 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.41□□□□□ -1.86
Usp4P35123 Gm23850-201ENSMUST00000083830 169 ntBASIC3.41□□□□□ -1.86
Usp4P35123 Gm23039-201ENSMUST00000083870 161 ntBASIC3.41□□□□□ -1.86
Usp4P35123 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp4P35123 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
Usp4P35123 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp4P35123 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Usp4P35123 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Usp4P35123 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
Usp4P35123 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Usp4P35123 Gm13345-201ENSMUST00000121928 228 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm14775-201ENSMUST00000122089 310 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm12443-201ENSMUST00000122308 323 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm22215-201ENSMUST00000157558 96 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm22337-201ENSMUST00000157721 132 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm26928-201ENSMUST00000182674 572 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.4□□□□□ -1.87
Usp4P35123 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.4□□□□□ -1.87
Usp4P35123 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm44938-201ENSMUST00000208614 427 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Gm39147-201ENSMUST00000211376 465 ntBASIC3.4□□□□□ -1.87
Usp4P35123 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.4□□□□□ -1.87
Usp4P35123 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.4□□□□□ -1.87
Usp4P35123 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Usp4P35123 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.4□□□□□ -1.87
Usp4P35123 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Usp4P35123 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Usp4P35123 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp4P35123 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
Usp4P35123 Mir291a-201ENSMUST00000104815 82 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm14811-201ENSMUST00000117070 117 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm14402-201ENSMUST00000122217 508 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm26026-201ENSMUST00000122726 123 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm23331-201ENSMUST00000157423 108 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm23219-201ENSMUST00000158123 87 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm27869-201ENSMUST00000184327 122 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Mir465d-201ENSMUST00000196314 58 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.39□□□□□ -1.87
Usp4P35123 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp4P35123 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm9765-201ENSMUST00000043170 321 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Usp4P35123 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Usp4P35123 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.39□□□□□ -1.87
Usp4P35123 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
Usp4P35123 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Usp4P35123 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp4P35123 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Usp4P35123 Gm23472-201ENSMUST00000101806 191 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Usp4P35123 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp4P35123 Gm14973-201ENSMUST00000117248 255 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm7123-201ENSMUST00000117647 213 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm9119-201ENSMUST00000118866 495 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm22956-201ENSMUST00000122520 80 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm25115-201ENSMUST00000157187 140 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm25015-201ENSMUST00000158400 128 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm24497-201ENSMUST00000177868 191 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm27220-201ENSMUST00000183453 262 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Mir6371-201ENSMUST00000184470 111 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm27540-201ENSMUST00000184950 187 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm43217-201ENSMUST00000199513 367 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm44600-201ENSMUST00000208540 111 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm9712-201ENSMUST00000210842 311 ntBASIC3.38□□□□□ -1.87
Usp4P35123 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.38□□□□□ -1.87
Usp4P35123 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.38□□□□□ -1.87
Usp4P35123 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm23444-201ENSMUST00000082922 191 ntBASIC3.38□□□□□ -1.87
Usp4P35123 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.38□□□□□ -1.87
Usp4P35123 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Usp4P35123 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Usp4P35123 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp4P35123 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp4P35123 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Usp4P35123 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.37□□□□□ -1.87
Usp4P35123 Gm26423-201ENSMUST00000104277 128 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms