Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm22886-201ENSMUST00000093714 107 ntBASIC1.84□□□□□ -2.11
Cd40lgP27548 Gm22170-201ENSMUST00000097247 107 ntBASIC1.84□□□□□ -2.11
Cd40lgP27548 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Cd40lgP27548 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Cd40lgP27548 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm13728-201ENSMUST00000117471 400 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm15067-201ENSMUST00000119534 156 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Trav20-201ENSMUST00000142754 347 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Cd40lgP27548 U6.1-201ENSMUST00000157443 101 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm25454-201ENSMUST00000157947 315 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Mir195b-201ENSMUST00000184814 97 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm29134-201ENSMUST00000186579 126 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm28337-201ENSMUST00000190425 666 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm18971-201ENSMUST00000197240 374 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.83□□□□□ -2.12
Cd40lgP27548 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm45386-201ENSMUST00000210194 218 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm17990-201ENSMUST00000211728 553 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm7214-201ENSMUST00000222428 272 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 CT025603.4-201ENSMUST00000225777 413 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm23614-201ENSMUST00000082598 107 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm24165-201ENSMUST00000082718 128 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Mir300-201ENSMUST00000083485 79 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.83□□□□□ -2.12
Cd40lgP27548 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Cd40lgP27548 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Mir3096-201ENSMUST00000116685 71 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm11386-201ENSMUST00000117761 347 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm25335-201ENSMUST00000158043 103 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm22803-201ENSMUST00000158049 283 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm22535-201ENSMUST00000158174 119 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm22136-201ENSMUST00000158751 268 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm17148-201ENSMUST00000164702 249 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm26501-201ENSMUST00000178307 107 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Mir6406-201ENSMUST00000183592 120 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Mir6376-201ENSMUST00000185149 131 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm28740-201ENSMUST00000186142 215 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm44465-201ENSMUST00000199536 114 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm44938-201ENSMUST00000208614 427 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm46312-201ENSMUST00000220961 420 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Gm25124-201ENSMUST00000083345 164 ntBASIC1.82□□□□□ -2.12
Cd40lgP27548 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Cd40lgP27548 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cd40lgP27548 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm22656-201ENSMUST00000104199 171 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm12304-201ENSMUST00000120312 385 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm24481-201ENSMUST00000157210 102 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm24577-201ENSMUST00000158580 63 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm23342-201ENSMUST00000158958 115 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm27511-201ENSMUST00000183502 127 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.81□□□□□ -2.12
Cd40lgP27548 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm42622-201ENSMUST00000197229 355 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm43739-201ENSMUST00000198294 307 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm44533-201ENSMUST00000207782 268 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm45375-201ENSMUST00000210338 280 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.81□□□□□ -2.12
Cd40lgP27548 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.81□□□□□ -2.12
Cd40lgP27548 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.81□□□□□ -2.12
Cd40lgP27548 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.81□□□□□ -2.12
Cd40lgP27548 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Cd40lgP27548 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Cd40lgP27548 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm14774-201ENSMUST00000117857 536 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm23331-201ENSMUST00000157423 108 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm25384-201ENSMUST00000157807 105 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm23557-201ENSMUST00000157820 138 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm27510-201ENSMUST00000158214 64 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm26430-201ENSMUST00000178054 107 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm21978-201ENSMUST00000179696 377 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm28925-201ENSMUST00000188586 168 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm42672-201ENSMUST00000197821 352 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.8□□□□□ -2.12
Cd40lgP27548 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.8□□□□□ -2.12
Cd40lgP27548 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Cd40lgP27548 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Cd40lgP27548 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Cd40lgP27548 Gm23011-201ENSMUST00000104148 132 ntBASIC1.79□□□□□ -2.12
Cd40lgP27548 Gm13439-201ENSMUST00000117541 409 ntBASIC1.79□□□□□ -2.12
Cd40lgP27548 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms