Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm23718-201ENSMUST00000157350 307 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm24780-201ENSMUST00000157635 143 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm23548-201ENSMUST00000158963 106 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.42□□□□□ -2.18
Sdc1P18828 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.42□□□□□ -2.18
Sdc1P18828 Gm22166-201ENSMUST00000178419 121 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm23288-201ENSMUST00000179213 121 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm27443-201ENSMUST00000184660 98 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm18296-201ENSMUST00000192475 783 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm43587-201ENSMUST00000199590 204 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm42578-201ENSMUST00000199960 194 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm44282-201ENSMUST00000203199 190 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm44655-201ENSMUST00000207768 423 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.42□□□□□ -2.18
Sdc1P18828 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Sdc1P18828 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Sdc1P18828 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.42□□□□□ -2.18
Sdc1P18828 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm11854-201ENSMUST00000117839 446 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm14848-201ENSMUST00000121850 467 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm23212-201ENSMUST00000122718 60 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm23043-201ENSMUST00000157890 109 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm22891-201ENSMUST00000158641 164 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm22500-201ENSMUST00000158982 99 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm20656-201ENSMUST00000176925 518 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm27385-201ENSMUST00000184747 104 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm28151-201ENSMUST00000189404 951 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm28437-201ENSMUST00000190277 783 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Sdc1P18828 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Sdc1P18828 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.41□□□□□ -2.18
Sdc1P18828 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm25859-201ENSMUST00000083710 91 ntBASIC1.41□□□□□ -2.18
Sdc1P18828 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Sdc1P18828 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Sdc1P18828 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
Sdc1P18828 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Sdc1P18828 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Sdc1P18828 Gm24122-201ENSMUST00000104107 132 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm25168-201ENSMUST00000104189 132 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm26015-201ENSMUST00000104402 125 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm13153-201ENSMUST00000120969 637 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm24262-201ENSMUST00000157431 144 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm23391-201ENSMUST00000157579 104 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm22082-201ENSMUST00000157587 161 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm21815-201ENSMUST00000178213 664 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm20874-201ENSMUST00000178356 663 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Sdc1P18828 Gm23523-201ENSMUST00000180190 107 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.4□□□□□ -2.19
Sdc1P18828 Gm27265-201ENSMUST00000183559 77 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm27248-201ENSMUST00000184004 166 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Mir6388-201ENSMUST00000184417 75 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm8151-201ENSMUST00000184817 871 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.4□□□□□ -2.19
Sdc1P18828 Gm18546-201ENSMUST00000197245 676 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.4□□□□□ -2.19
Sdc1P18828 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Sdc1P18828 Gm11598-201ENSMUST00000119257 357 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm6025-201ENSMUST00000121517 201 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Sdc1P18828 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.39□□□□□ -2.19
Sdc1P18828 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Sdc1P18828 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.39□□□□□ -2.19
Sdc1P18828 Gm26149-201ENSMUST00000157432 108 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm22654-201ENSMUST00000157874 105 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm24901-201ENSMUST00000158125 110 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm27510-201ENSMUST00000158214 64 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm22075-201ENSMUST00000158599 192 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm23090-201ENSMUST00000177331 78 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Sdc1P18828 Trbv22-201ENSMUST00000191697 291 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm36891-201ENSMUST00000191995 655 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm19694-201ENSMUST00000192364 505 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Gm33866-201ENSMUST00000196911 289 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.39□□□□□ -2.19
Sdc1P18828 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.39□□□□□ -2.19
Sdc1P18828 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.39□□□□□ -2.19
Sdc1P18828 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Sdc1P18828 Gm26457-201ENSMUST00000082678 78 ntBASIC1.39□□□□□ -2.19
Sdc1P18828 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Sdc1P18828 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Sdc1P18828 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
Sdc1P18828 Gm24338-201ENSMUST00000104205 127 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm24282-201ENSMUST00000104232 66 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Mir1195-201ENSMUST00000116818 98 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm22713-201ENSMUST00000116895 130 ntBASIC1.38□□□□□ -2.19
Sdc1P18828 Gm13457-201ENSMUST00000117885 267 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms