Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Cdx1P18111 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.36□□□□□ -2.19
Cdx1P18111 Snord14a-201ENSMUST00000082807 87 ntBASIC1.36□□□□□ -2.19
Cdx1P18111 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Cdx1P18111 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Cdx1P18111 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Cdx1P18111 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Cdx1P18111 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm24889-201ENSMUST00000104388 132 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm23907-201ENSMUST00000104595 189 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Mir190b-201ENSMUST00000104803 80 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm15861-201ENSMUST00000120979 339 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Snord13-201ENSMUST00000157627 104 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm24768-201ENSMUST00000158512 94 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm23145-201ENSMUST00000178912 79 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm22510-201ENSMUST00000179304 79 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm26336-201ENSMUST00000179449 79 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm26390-201ENSMUST00000179628 79 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Cdx1P18111 Mir7679-201ENSMUST00000183379 63 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Cdx1P18111 Mir6419-201ENSMUST00000184784 113 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.35□□□□□ -2.19
Cdx1P18111 Gm37923-201ENSMUST00000191624 161 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm37162-201ENSMUST00000191708 551 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm18546-201ENSMUST00000197245 676 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm44655-201ENSMUST00000207768 423 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.35□□□□□ -2.19
Cdx1P18111 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Gm25651-201ENSMUST00000083782 119 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Cdx1P18111 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.35□□□□□ -2.19
Cdx1P18111 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Cdx1P18111 Gm14007-201ENSMUST00000118288 210 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Cdx1P18111 Gm9593-201ENSMUST00000166034 469 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 Gm27711-201ENSMUST00000183802 118 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.34□□□□□ -2.19
Cdx1P18111 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.34□□□□□ -2.19
Cdx1P18111 Gm44962-201ENSMUST00000206460 279 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 Gm44910-201ENSMUST00000208451 396 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.34□□□□□ -2.19
Cdx1P18111 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.34□□□□□ -2.19
Cdx1P18111 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Cdx1P18111 Gm10092-201ENSMUST00000077110 180 ntBASIC1.34□□□□□ -2.19
Cdx1P18111 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
Cdx1P18111 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Cdx1P18111 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cdx1P18111 Gm13059-201ENSMUST00000119881 398 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm24892-201ENSMUST00000122747 104 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm23120-201ENSMUST00000157654 287 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm25384-201ENSMUST00000157807 105 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm26004-201ENSMUST00000158804 116 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm23777-201ENSMUST00000158994 259 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.33□□□□□ -2.2
Cdx1P18111 Gm20438-201ENSMUST00000174441 329 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm20689-201ENSMUST00000176033 279 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm23714-201ENSMUST00000179259 105 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.33□□□□□ -2.2
Cdx1P18111 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.33□□□□□ -2.2
Cdx1P18111 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.33□□□□□ -2.2
Cdx1P18111 Gm28474-201ENSMUST00000188501 315 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.33□□□□□ -2.2
Cdx1P18111 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm44483-201ENSMUST00000197203 97 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.33□□□□□ -2.2
Cdx1P18111 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Gm40810-201ENSMUST00000219149 253 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 AC174797.4-201ENSMUST00000225510 347 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.33□□□□□ -2.2
Cdx1P18111 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Cdx1P18111 Gm25759-201ENSMUST00000103988 129 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm25495-201ENSMUST00000104431 131 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm11606-201ENSMUST00000120706 617 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm12779-201ENSMUST00000121496 143 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm22818-201ENSMUST00000157446 104 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm23267-201ENSMUST00000178490 132 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Zfp950-206ENSMUST00000178819 171 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
Cdx1P18111 Gm29397-201ENSMUST00000185205 333 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm29134-201ENSMUST00000186579 126 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Gm28337-201ENSMUST00000190425 666 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.32□□□□□ -2.2
Cdx1P18111 Gm31123-201ENSMUST00000192094 666 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Cdx1P18111 Gm44990-201ENSMUST00000203922 217 ntBASIC1.32□□□□□ -2.2
Cdx1P18111 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 320.6 ms