Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm27517-201ENSMUST00000184347 236 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm38274-201ENSMUST00000195689 148 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm18691-201ENSMUST00000203593 872 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm26328-201ENSMUST00000082821 107 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm25794-201ENSMUST00000083286 107 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm26166-201ENSMUST00000083788 107 ntBASIC0.64□□□□□ -2.31
Col1a1P11087 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Col1a1P11087 Gm24079-201ENSMUST00000104352 132 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm15193-201ENSMUST00000120224 865 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm12044-201ENSMUST00000120335 213 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm11606-201ENSMUST00000120706 617 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Col1a1P11087 Gm23124-201ENSMUST00000157650 107 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm22731-201ENSMUST00000158086 94 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm25243-201ENSMUST00000174912 207 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Mir6419-201ENSMUST00000184784 113 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm43493-201ENSMUST00000199837 202 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm33654-201ENSMUST00000221704 215 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm23924-201ENSMUST00000082474 108 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Gm26175-201ENSMUST00000083794 131 ntBASIC0.63□□□□□ -2.31
Col1a1P11087 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Col1a1P11087 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
Col1a1P11087 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
Col1a1P11087 Gm22544-201ENSMUST00000104349 127 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Gm15878-201ENSMUST00000127561 306 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Gm25423-201ENSMUST00000157609 107 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Col1a1P11087 Mir28b-201ENSMUST00000175399 80 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Gm28912-201ENSMUST00000189001 234 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Gm45387-201ENSMUST00000209792 632 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Snora41-201ENSMUST00000082668 132 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Gm26265-201ENSMUST00000083277 135 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Snord32a-201ENSMUST00000083285 83 ntBASIC0.62□□□□□ -2.31
Col1a1P11087 Gm23202-201ENSMUST00000104376 129 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm12045-201ENSMUST00000122122 573 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm22075-201ENSMUST00000158599 192 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col1a1P11087 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col1a1P11087 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Col1a1P11087 Mir3068-202ENSMUST00000197755 79 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm44655-201ENSMUST00000207768 423 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm18774-201ENSMUST00000218269 601 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Mir224-201ENSMUST00000083608 82 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col1a1P11087 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
Col1a1P11087 Gm27396-201ENSMUST00000157708 58 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm25012-201ENSMUST00000158396 164 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm20415-201ENSMUST00000172877 423 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm24020-201ENSMUST00000180156 108 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Col1a1P11087 Gm18854-201ENSMUST00000211196 329 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm24152-201ENSMUST00000082764 163 ntBASIC0.61□□□□□ -2.31
Col1a1P11087 Gm22678-201ENSMUST00000116974 101 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm14358-201ENSMUST00000118458 403 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Col1a1P11087 Gm24969-201ENSMUST00000180331 79 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm27640-201ENSMUST00000184580 147 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm43583-201ENSMUST00000199235 303 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm44301-201ENSMUST00000200362 143 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Col1a1P11087 Gm10092-201ENSMUST00000077110 180 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm22302-201ENSMUST00000082657 106 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm23299-201ENSMUST00000082708 79 ntBASIC0.6□□□□□ -2.31
Col1a1P11087 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.59□□□□□ -2.31
Col1a1P11087 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.59□□□□□ -2.31
Col1a1P11087 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
Col1a1P11087 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.59□□□□□ -2.32
Col1a1P11087 Gm25115-201ENSMUST00000157187 140 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Gm22392-201ENSMUST00000177971 107 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.59□□□□□ -2.32
Col1a1P11087 Gm18357-201ENSMUST00000188184 580 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Gm43245-201ENSMUST00000197603 468 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Mir3961-201ENSMUST00000198795 59 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Gm44989-201ENSMUST00000204749 217 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Gm44910-201ENSMUST00000208451 396 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 Snora34-201ENSMUST00000083402 138 ntBASIC0.59□□□□□ -2.32
Col1a1P11087 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm22496-201ENSMUST00000104493 88 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm11813-201ENSMUST00000118586 291 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm15861-201ENSMUST00000120979 339 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm11575-201ENSMUST00000122243 228 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm23672-201ENSMUST00000157471 107 ntBASIC0.58□□□□□ -2.32
Col1a1P11087 Gm25175-201ENSMUST00000178712 79 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms