| Hoxa4 | P06798 | Gm45403-201 | ENSMUST00000209453 | 276 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr1459-201 | ENSMUST00000078299 | 1102 nt | APPRIS P1 BASIC | 2.27 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr1340-201 | ENSMUST00000094834 | 951 nt | APPRIS P1 BASIC | 2.27 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr201-202 | ENSMUST00000216834 | 3706 nt | APPRIS P1 TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr902-202 | ENSMUST00000213105 | 2113 nt | APPRIS P1 TSL 5 BASIC | 2.27 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm3081-201 | ENSMUST00000193413 | 3025 nt | BASIC | 2.27 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm42639-201 | ENSMUST00000197061 | 1871 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm23472-201 | ENSMUST00000101806 | 191 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mir687-201 | ENSMUST00000102166 | 89 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm26015-201 | ENSMUST00000104402 | 125 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25728-201 | ENSMUST00000104525 | 159 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm26156-201 | ENSMUST00000116999 | 123 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm14843-201 | ENSMUST00000119596 | 212 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm13588-201 | ENSMUST00000120026 | 135 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm15718-201 | ENSMUST00000131085 | 311 nt | TSL 3 BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm23956-201 | ENSMUST00000157211 | 119 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25184-201 | ENSMUST00000157753 | 163 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm20484-201 | ENSMUST00000173738 | 231 nt | TSL 2 BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm26195-201 | ENSMUST00000175035 | 101 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm26426-201 | ENSMUST00000177866 | 123 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm24497-201 | ENSMUST00000177868 | 191 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm26501-201 | ENSMUST00000178307 | 107 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm24264-201 | ENSMUST00000179835 | 94 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25939-201 | ENSMUST00000179876 | 191 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm26060-201 | ENSMUST00000180094 | 123 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Trav6-3-202 | ENSMUST00000183604 | 305 nt | APPRIS P1 BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Trav6d-3-202 | ENSMUST00000184883 | 308 nt | APPRIS P1 BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm29397-201 | ENSMUST00000185205 | 333 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm7871-201 | ENSMUST00000195346 | 618 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mir497-201 | ENSMUST00000200557 | 84 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm9318-201 | ENSMUST00000222444 | 438 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | AC154506.1-201 | ENSMUST00000225178 | 621 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25796-201 | ENSMUST00000082645 | 163 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm23444-201 | ENSMUST00000082922 | 191 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mir10a-201 | ENSMUST00000083585 | 110 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mirlet7c-1-201 | ENSMUST00000083623 | 94 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | AC160115.1-201 | ENSMUST00000224678 | 1574 nt | BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Acer3-202 | ENSMUST00000120520 | 3964 nt | TSL 1 (best) BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr1457-204 | ENSMUST00000215229 | 2538 nt | APPRIS P1 TSL 5 BASIC | 2.26 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm3867-202 | ENSMUST00000181639 | 2007 nt | TSL 2 BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | AC121598.3-201 | ENSMUST00000227179 | 1643 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25526-201 | ENSMUST00000104332 | 132 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm14269-201 | ENSMUST00000120455 | 306 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm13396-201 | ENSMUST00000120617 | 271 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm15536-201 | ENSMUST00000121411 | 114 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm27510-201 | ENSMUST00000158214 | 64 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm22947-201 | ENSMUST00000158559 | 91 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm21913-201 | ENSMUST00000179880 | 1083 nt | APPRIS P1 BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | 1700029M03Rik-201 | ENSMUST00000187300 | 444 nt | TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mir7232-201 | ENSMUST00000197929 | 74 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25820-201 | ENSMUST00000198589 | 127 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm43587-201 | ENSMUST00000199590 | 204 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm44055-201 | ENSMUST00000204376 | 247 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm44825-201 | ENSMUST00000207557 | 150 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm44598-201 | ENSMUST00000207566 | 150 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr505-ps1-201 | ENSMUST00000207626 | 976 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr515-ps1-201 | ENSMUST00000208389 | 189 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr1285-201 | ENSMUST00000208523 | 903 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm18000-201 | ENSMUST00000212153 | 800 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | AC101984.1-201 | ENSMUST00000219639 | 402 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | CT572985.2-201 | ENSMUST00000220496 | 211 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm21937-201 | ENSMUST00000222825 | 218 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | AC158395.1-201 | ENSMUST00000227206 | 452 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm9772-201 | ENSMUST00000075018 | 408 nt | APPRIS P1 TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm23412-201 | ENSMUST00000083017 | 107 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25199-201 | ENSMUST00000083095 | 104 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm24661-201 | ENSMUST00000083205 | 104 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25411-201 | ENSMUST00000083760 | 151 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mir496a-201 | ENSMUST00000093627 | 79 nt | BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Cd209e-201 | ENSMUST00000033888 | 1802 nt | APPRIS P1 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr1135-202 | ENSMUST00000213835 | 2648 nt | APPRIS P1 TSL 5 BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Tlr8-202 | ENSMUST00000112170 | 3431 nt | APPRIS P1 TSL 2 BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Ppp1r3a-201 | ENSMUST00000045096 | 6965 nt | APPRIS P1 TSL 1 (best) BASIC | 2.25 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Trdn-201 | ENSMUST00000095762 | 4514 nt | APPRIS P2 TSL 5 BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm37566-201 | ENSMUST00000192363 | 4355 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr58-202 | ENSMUST00000215112 | 2454 nt | APPRIS P1 TSL 2 BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm22496-201 | ENSMUST00000104493 | 88 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mir875-201 | ENSMUST00000104698 | 78 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25325-201 | ENSMUST00000122559 | 86 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm23230-201 | ENSMUST00000157298 | 133 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm26149-201 | ENSMUST00000157432 | 108 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm23262-201 | ENSMUST00000158323 | 168 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm3027-201 | ENSMUST00000167579 | 451 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25175-201 | ENSMUST00000178712 | 79 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm29192-201 | ENSMUST00000190942 | 377 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm20083-201 | ENSMUST00000205849 | 751 nt | TSL 3 BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm29818-201 | ENSMUST00000218070 | 165 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | AC121844.2-201 | ENSMUST00000219067 | 2066 nt | BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm44527-201 | ENSMUST00000182210 | 2945 nt | TSL 2 BASIC | 2.24 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm42482-201 | ENSMUST00000198904 | 1947 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Olfr352-202 | ENSMUST00000217325 | 3337 nt | APPRIS P1 TSL 5 BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm42755-201 | ENSMUST00000198533 | 1493 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm13457-201 | ENSMUST00000117885 | 267 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Scgb1b26-ps-201 | ENSMUST00000121845 | 291 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm25391-201 | ENSMUST00000157342 | 134 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm24997-201 | ENSMUST00000157910 | 105 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm24858-201 | ENSMUST00000158058 | 323 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm8114-201 | ENSMUST00000172225 | 484 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Mir5624-201 | ENSMUST00000176635 | 61 nt | BASIC | 2.23 | □□□□□ -2.05 | | |
| Hoxa4 | P06798 | Gm21776-201 | ENSMUST00000177676 | 1083 nt | APPRIS P1 BASIC | 2.23 | □□□□□ -2.05 | | |