Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.06□□□□□ -2.08
ClppO88696 CT025603.4-201ENSMUST00000225777 413 ntBASIC2.06□□□□□ -2.08
ClppO88696 Mir222-201ENSMUST00000083537 79 ntBASIC2.06□□□□□ -2.08
ClppO88696 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
ClppO88696 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
ClppO88696 Gm22093-201ENSMUST00000158980 111 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm17148-201ENSMUST00000164702 249 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm22192-201ENSMUST00000175128 85 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm28489-201ENSMUST00000186655 316 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm42622-201ENSMUST00000197229 355 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm43708-201ENSMUST00000198857 961 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.05□□□□□ -2.08
ClppO88696 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.05□□□□□ -2.08
ClppO88696 Gm20102-201ENSMUST00000222445 220 ntBASIC2.05□□□□□ -2.08
ClppO88696 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm25632-201ENSMUST00000083112 85 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm23246-201ENSMUST00000083371 67 ntBASIC2.05□□□□□ -2.08
ClppO88696 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.05□□□□□ -2.08
ClppO88696 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.05□□□□□ -2.08
ClppO88696 Gm24907-201ENSMUST00000116932 128 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm11386-201ENSMUST00000117761 347 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm15067-201ENSMUST00000119534 156 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm14709-201ENSMUST00000121225 304 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm14530-201ENSMUST00000122391 333 ntBASIC2.04□□□□□ -2.08
ClppO88696 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ClppO88696 Gm24481-201ENSMUST00000157210 102 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm23331-201ENSMUST00000157423 108 ntBASIC2.04□□□□□ -2.08
ClppO88696 U6.1-201ENSMUST00000157443 101 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm24783-201ENSMUST00000157639 100 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm25335-201ENSMUST00000158043 103 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm22803-201ENSMUST00000158049 283 ntBASIC2.04□□□□□ -2.08
ClppO88696 Snord11-201ENSMUST00000158468 84 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm24577-201ENSMUST00000158580 63 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm25020-201ENSMUST00000178071 107 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.04□□□□□ -2.08
ClppO88696 Gm44465-201ENSMUST00000199536 114 ntBASIC2.04□□□□□ -2.08
ClppO88696 Mir497-201ENSMUST00000200557 84 ntBASIC2.04□□□□□ -2.08
ClppO88696 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.04□□□□□ -2.08
ClppO88696 Mir301-201ENSMUST00000083655 86 ntBASIC2.04□□□□□ -2.08
ClppO88696 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
ClppO88696 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
ClppO88696 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
ClppO88696 Gm23011-201ENSMUST00000104148 132 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm13439-201ENSMUST00000117541 409 ntBASIC2.03□□□□□ -2.08
ClppO88696 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm12304-201ENSMUST00000120312 385 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ClppO88696 Gm25384-201ENSMUST00000157807 105 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm27510-201ENSMUST00000158214 64 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm23548-201ENSMUST00000158963 106 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm21978-201ENSMUST00000179696 377 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ClppO88696 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC2.03□□□□□ -2.08
ClppO88696 Gm28927-201ENSMUST00000191528 272 ntBASIC2.03□□□□□ -2.08
ClppO88696 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.03□□□□□ -2.08
ClppO88696 Mir7215-201ENSMUST00000200383 51 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm43865-201ENSMUST00000204721 127 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm44533-201ENSMUST00000207782 268 ntBASIC2.03□□□□□ -2.08
ClppO88696 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.03□□□□□ -2.08
ClppO88696 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.03□□□□□ -2.08
ClppO88696 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.03□□□□□ -2.08
ClppO88696 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
ClppO88696 Gm24151-201ENSMUST00000082758 141 ntBASIC2.03□□□□□ -2.08
ClppO88696 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.03□□□□□ -2.09
ClppO88696 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ClppO88696 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.02□□□□□ -2.09
ClppO88696 Mdga2-203ENSMUST00000113942 423 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm14774-201ENSMUST00000117857 536 ntBASIC2.02□□□□□ -2.09
ClppO88696 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm13588-201ENSMUST00000120026 135 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm11359-201ENSMUST00000120039 567 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm14215-201ENSMUST00000120578 221 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.02□□□□□ -2.09
ClppO88696 Gm24211-201ENSMUST00000158264 107 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm26430-201ENSMUST00000178054 107 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
ClppO88696 Mir6997-201ENSMUST00000184313 71 ntBASIC2.02□□□□□ -2.09
ClppO88696 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ClppO88696 Gm28740-201ENSMUST00000186142 215 ntBASIC2.02□□□□□ -2.09
ClppO88696 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.02□□□□□ -2.09
ClppO88696 Gm43367-201ENSMUST00000199986 625 ntBASIC2.02□□□□□ -2.09
ClppO88696 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.02□□□□□ -2.09
ClppO88696 Gm26265-201ENSMUST00000083277 135 ntBASIC2.02□□□□□ -2.09
ClppO88696 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
ClppO88696 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ClppO88696 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ClppO88696 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
ClppO88696 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
ClppO88696 Gm13457-201ENSMUST00000117885 267 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm25113-201ENSMUST00000157185 143 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm23557-201ENSMUST00000157820 138 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm24419-201ENSMUST00000157875 332 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm22099-201ENSMUST00000157925 123 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm24858-201ENSMUST00000158058 323 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm22727-201ENSMUST00000158090 116 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm22535-201ENSMUST00000158174 119 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm25658-201ENSMUST00000158472 128 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm16326-201ENSMUST00000162843 414 ntBASIC2.01□□□□□ -2.09
ClppO88696 Gm25996-201ENSMUST00000175393 117 ntBASIC2.01□□□□□ -2.09
ClppO88696 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms