Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm23741-201ENSMUST00000097237 171 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.44□□□□□ -2.18
Col5a1O88207 Gm11386-201ENSMUST00000117761 347 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm13457-201ENSMUST00000117885 267 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm11606-201ENSMUST00000120706 617 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm14638-201ENSMUST00000121338 216 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm15147-201ENSMUST00000122263 483 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm11254-201ENSMUST00000122368 653 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm24288-201ENSMUST00000157630 144 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm26181-201ENSMUST00000157687 106 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm24418-201ENSMUST00000177597 79 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm24639-201ENSMUST00000178518 79 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm23076-201ENSMUST00000179082 79 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm25077-201ENSMUST00000179157 79 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm28755-201ENSMUST00000185773 199 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm5001-201ENSMUST00000204361 331 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm44472-201ENSMUST00000204922 943 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm44870-201ENSMUST00000207291 357 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 AC102369.1-201ENSMUST00000218415 373 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm22740-201ENSMUST00000083439 109 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm23093-201ENSMUST00000083450 102 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm25411-201ENSMUST00000083760 151 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Col5a1O88207 Gm22021-201ENSMUST00000104353 107 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm22032-201ENSMUST00000116946 116 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm11785-201ENSMUST00000120165 601 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col5a1O88207 Gm25243-201ENSMUST00000174912 207 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Mir5129-201ENSMUST00000174938 78 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm21171-201ENSMUST00000180048 673 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.43□□□□□ -2.18
Col5a1O88207 Trbv24-201ENSMUST00000194614 347 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm37399-201ENSMUST00000195224 416 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm18971-201ENSMUST00000197240 374 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.43□□□□□ -2.18
Col5a1O88207 Gm45387-201ENSMUST00000209792 632 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.43□□□□□ -2.18
Col5a1O88207 Gm7692-201ENSMUST00000213534 409 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm18188-201ENSMUST00000219386 478 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Col5a1O88207 Snord42a-201ENSMUST00000082606 65 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm26263-201ENSMUST00000083281 164 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm25579-201ENSMUST00000083407 106 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Mir452-201ENSMUST00000093629 85 ntBASIC1.43□□□□□ -2.18
Col5a1O88207 Gm22496-201ENSMUST00000104493 88 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Gm25637-201ENSMUST00000157529 107 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Gm22516-201ENSMUST00000158266 124 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Gm24552-201ENSMUST00000158646 103 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Col5a1O88207 Gm25175-201ENSMUST00000178712 79 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.42□□□□□ -2.18
Col5a1O88207 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Col5a1O88207 Gm45101-201ENSMUST00000208327 232 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 AC104832.1-201ENSMUST00000222938 550 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.42□□□□□ -2.18
Col5a1O88207 Gm22364-201ENSMUST00000083097 98 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Gm22287-201ENSMUST00000083197 107 ntBASIC1.42□□□□□ -2.18
Col5a1O88207 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Col5a1O88207 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Col5a1O88207 Gm14923-201ENSMUST00000118270 155 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Gm11849-201ENSMUST00000121293 261 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Gm24630-201ENSMUST00000122768 106 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col5a1O88207 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col5a1O88207 Gm27999-201ENSMUST00000183539 193 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Gm27921-201ENSMUST00000183968 108 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Gm27493-201ENSMUST00000184128 78 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.41□□□□□ -2.18
Col5a1O88207 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.41□□□□□ -2.18
Col5a1O88207 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Col5a1O88207 Gm26056-201ENSMUST00000083043 104 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Gm381-201ENSMUST00000117443 2037 ntBASIC1.41□□□□□ -2.18
Col5a1O88207 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
Col5a1O88207 Gm22831-201ENSMUST00000102473 109 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Mir759-201ENSMUST00000103254 98 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm22658-201ENSMUST00000104196 155 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm14852-201ENSMUST00000120065 647 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm12238-201ENSMUST00000127764 124 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm26414-201ENSMUST00000157674 269 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm22098-201ENSMUST00000157930 85 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm25434-201ENSMUST00000158278 167 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm22766-201ENSMUST00000158372 99 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm23660-201ENSMUST00000178362 79 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm24088-201ENSMUST00000179100 79 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm9227-201ENSMUST00000194733 566 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Gm44478-201ENSMUST00000204875 114 ntBASIC1.4□□□□□ -2.18
Col5a1O88207 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC1.4□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 119 ms