Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Gm26314-201ENSMUST00000083891 107 ntBASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
Trav13d-3J3QMG8 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Mir542-201ENSMUST00000102186 85 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Snora36b-201ENSMUST00000104383 132 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm22678-201ENSMUST00000116974 101 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm6574-201ENSMUST00000120037 362 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm5396-201ENSMUST00000121222 532 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm12617-201ENSMUST00000121268 381 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm24691-201ENSMUST00000157762 140 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm25066-201ENSMUST00000158145 123 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm25488-201ENSMUST00000158728 118 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm24304-201ENSMUST00000177635 107 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm3852-201ENSMUST00000182781 264 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Mir7013-201ENSMUST00000183540 72 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm28016-201ENSMUST00000184594 196 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm44429-201ENSMUST00000203542 186 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm25937-201ENSMUST00000083912 107 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Trav13d-3J3QMG8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm25270-201ENSMUST00000122606 138 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm22598-201ENSMUST00000157600 127 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm23779-201ENSMUST00000157938 64 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm23223-201ENSMUST00000158119 127 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm24726-201ENSMUST00000158232 121 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm24212-201ENSMUST00000158258 132 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm25457-201ENSMUST00000179509 107 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm28717-201ENSMUST00000189950 315 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm44811-201ENSMUST00000209120 228 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm2829-201ENSMUST00000213121 499 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm23412-201ENSMUST00000083017 107 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Gm24817-201ENSMUST00000093672 105 ntBASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Trav13d-3J3QMG8 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm24122-201ENSMUST00000104107 132 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm26473-201ENSMUST00000116763 127 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm24892-201ENSMUST00000122747 104 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm2830-201ENSMUST00000140330 385 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm23470-201ENSMUST00000157129 120 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm22843-201ENSMUST00000157710 134 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm22416-201ENSMUST00000158590 88 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm25119-201ENSMUST00000158815 88 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm20660-201ENSMUST00000177515 289 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm23860-201ENSMUST00000179446 132 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm26200-201ENSMUST00000180273 79 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm27532-201ENSMUST00000183726 113 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm28418-201ENSMUST00000186179 423 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm28995-201ENSMUST00000186625 261 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Trbv18-201ENSMUST00000194256 294 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm44010-201ENSMUST00000204432 331 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm45673-201ENSMUST00000210293 358 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm8031-201ENSMUST00000213430 626 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Gm22622-201ENSMUST00000082870 129 ntBASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav13d-3J3QMG8 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Trav13d-3J3QMG8 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm14307-201ENSMUST00000118930 291 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm12646-201ENSMUST00000119144 238 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm13518-201ENSMUST00000120018 233 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm11254-201ENSMUST00000122368 653 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm14297-201ENSMUST00000129110 291 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm16362-201ENSMUST00000135189 214 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm16358-201ENSMUST00000146046 210 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm24922-201ENSMUST00000158511 102 ntBASIC2.15□□□□□ -2.07
Trav13d-3J3QMG8 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms