Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm43563-201ENSMUST00000196761 198 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 AC192091.2-201ENSMUST00000217869 117 ntBASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Pcdh1F7BJK1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm24792-201ENSMUST00000104286 128 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm14748-201ENSMUST00000119819 411 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm14069-201ENSMUST00000120815 229 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm25716-201ENSMUST00000158628 104 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm18486-201ENSMUST00000184040 298 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm27189-201ENSMUST00000184119 190 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm28030-201ENSMUST00000184987 138 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm29005-201ENSMUST00000186773 320 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm18991-201ENSMUST00000209225 746 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm45539-201ENSMUST00000210313 428 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm45796-201ENSMUST00000212483 114 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 AC132615.1-201ENSMUST00000213873 255 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 AC164561.1-201ENSMUST00000220414 115 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm22978-201ENSMUST00000082607 160 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm24355-201ENSMUST00000082858 122 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.14□□□□□ -1.91
Pcdh1F7BJK1 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm26145-201ENSMUST00000104476 127 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm13167-201ENSMUST00000118554 578 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm25985-201ENSMUST00000122677 107 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm24892-201ENSMUST00000122747 104 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm15733-201ENSMUST00000132957 242 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm23642-201ENSMUST00000157858 258 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm28010-201ENSMUST00000179485 126 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm29408-201ENSMUST00000187536 216 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm35405-201ENSMUST00000218754 400 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 AC122242.1-201ENSMUST00000224650 304 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Pcdh1F7BJK1 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Gm23589-201ENSMUST00000157660 105 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Gm24053-201ENSMUST00000158620 105 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Gm21827-201ENSMUST00000178247 423 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Mir129b-201ENSMUST00000197461 65 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Gm25205-201ENSMUST00000082841 103 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Snora19-201ENSMUST00000082962 132 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 AF357341-201ENSMUST00000083088 75 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Gm23658-201ENSMUST00000083233 132 ntBASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Pcdh1F7BJK1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Gm24582-201ENSMUST00000103967 103 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Gm26249-201ENSMUST00000116708 118 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Gm22034-201ENSMUST00000157283 134 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Gm23775-201ENSMUST00000158991 249 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Gm37239-201ENSMUST00000193510 141 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 AC151902.2-201ENSMUST00000226419 301 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Gm22297-201ENSMUST00000083312 106 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.11□□□□□ -1.91
Pcdh1F7BJK1 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Pcdh1F7BJK1 Snord14c-201ENSMUST00000101927 86 ntBASIC3.1□□□□□ -1.91
Pcdh1F7BJK1 Gm24263-201ENSMUST00000104059 107 ntBASIC3.1□□□□□ -1.91
Pcdh1F7BJK1 Gm26418-201ENSMUST00000104275 137 ntBASIC3.1□□□□□ -1.91
Pcdh1F7BJK1 Gm5762-201ENSMUST00000119204 258 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms