Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm29413-201ENSMUST00000186019 880 ntBASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm29134-201ENSMUST00000186579 126 ntBASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm29639-201ENSMUST00000188375 580 ntBASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm28337-201ENSMUST00000190425 666 ntBASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm31123-201ENSMUST00000192094 666 ntBASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Gm36997-201ENSMUST00000195090 707 ntBASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Col6a3E9PWQ3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Mir3108-201ENSMUST00000175500 79 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Mir6338-201ENSMUST00000183389 109 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Mir7086-201ENSMUST00000183683 65 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm43142-201ENSMUST00000198670 361 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm43090-201ENSMUST00000202459 314 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm43897-201ENSMUST00000204019 309 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm17991-201ENSMUST00000208139 297 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm24622-201ENSMUST00000082619 162 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm22299-201ENSMUST00000082663 136 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm22785-201ENSMUST00000104087 132 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 n-R5s171-201ENSMUST00000104128 79 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm14946-201ENSMUST00000119859 296 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm23559-201ENSMUST00000157824 103 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm27944-201ENSMUST00000185155 103 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm23627-201ENSMUST00000082459 107 ntBASIC0.06□□□□□ -2.4
Col6a3E9PWQ3 Gm11367-201ENSMUST00000117802 120 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm12053-201ENSMUST00000119022 252 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm14363-201ENSMUST00000122304 409 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm25666-201ENSMUST00000157702 107 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Mir3057-201ENSMUST00000175040 91 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Mir7683-201ENSMUST00000183842 61 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm44727-201ENSMUST00000204225 451 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm13378-201ENSMUST00000117483 336 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm24400-201ENSMUST00000157865 107 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm22385-201ENSMUST00000158189 101 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Mir3470a-201ENSMUST00000175223 77 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Mdga2-203ENSMUST00000113942 423 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm45878-201ENSMUST00000211839 241 ntBASIC0.05□□□□□ -2.4
Col6a3E9PWQ3 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm14577-201ENSMUST00000121134 256 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm25393-201ENSMUST00000157336 285 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm37568-201ENSMUST00000191755 364 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm45704-201ENSMUST00000212582 403 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm15084-201ENSMUST00000178585 1502 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm12449-201ENSMUST00000117572 234 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm26102-201ENSMUST00000157251 284 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm24908-201ENSMUST00000157294 127 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm23229-201ENSMUST00000157297 105 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm24959-201ENSMUST00000157924 146 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm24229-201ENSMUST00000158830 118 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm23523-201ENSMUST00000180190 107 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm5329-201ENSMUST00000186898 463 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm26265-202ENSMUST00000196326 133 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 AC154296.1-201ENSMUST00000198150 67 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm22293-201ENSMUST00000083314 109 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm26074-201ENSMUST00000104063 129 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm14566-201ENSMUST00000118915 321 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm13804-201ENSMUST00000119552 172 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm15381-201ENSMUST00000121501 1156 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm2628-201ENSMUST00000218019 426 ntBASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Col6a3E9PWQ3 Gm26143-201ENSMUST00000104480 108 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Gm25338-201ENSMUST00000116849 120 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Gm14771-201ENSMUST00000118249 203 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Gm25149-201ENSMUST00000157119 82 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Gm26038-201ENSMUST00000158151 106 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Gm18268-201ENSMUST00000208445 943 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 AC155314.1-201ENSMUST00000227624 508 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
Col6a3E9PWQ3 Mir695-201ENSMUST00000102261 109 ntBASIC0.03□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms