Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.34□□□□□ -2.35
Trav12-1A0N8R1 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 Gm11358-201ENSMUST00000122310 373 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 Gm23206-201ENSMUST00000122720 184 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 Gm22522-201ENSMUST00000158271 151 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 Gm23858-201ENSMUST00000158384 106 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 Gm24152-201ENSMUST00000082764 163 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 Gm5670-201ENSMUST00000093546 372 ntBASIC0.34□□□□□ -2.36
Trav12-1A0N8R1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm15365-201ENSMUST00000122392 300 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm24839-201ENSMUST00000122602 107 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm25663-201ENSMUST00000157698 135 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm9022-202ENSMUST00000183285 483 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm29288-201ENSMUST00000191582 901 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm36966-201ENSMUST00000192217 413 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm38044-201ENSMUST00000192964 487 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm37399-201ENSMUST00000195224 416 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm24920-201ENSMUST00000083018 85 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Gm23741-201ENSMUST00000097237 171 ntBASIC0.33□□□□□ -2.36
Trav12-1A0N8R1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm23015-201ENSMUST00000104145 128 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm14624-201ENSMUST00000117746 192 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm20438-201ENSMUST00000174441 329 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Mir3968-201ENSMUST00000175355 100 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28110-201ENSMUST00000185782 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29057-201ENSMUST00000186468 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28737-201ENSMUST00000186808 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29147-201ENSMUST00000186846 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29118-201ENSMUST00000186908 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28433-201ENSMUST00000187085 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29227-201ENSMUST00000187139 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28759-201ENSMUST00000187621 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28831-201ENSMUST00000187739 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29034-201ENSMUST00000188099 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28752-201ENSMUST00000188340 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28474-201ENSMUST00000188501 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28569-201ENSMUST00000188748 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28120-201ENSMUST00000188812 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28369-201ENSMUST00000188993 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28537-201ENSMUST00000189026 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28861-201ENSMUST00000189681 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28717-201ENSMUST00000189950 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29180-201ENSMUST00000190003 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29575-201ENSMUST00000190597 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29490-201ENSMUST00000190923 342 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29631-201ENSMUST00000191065 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm28160-201ENSMUST00000191229 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm29469-201ENSMUST00000191448 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm37658-201ENSMUST00000192672 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm37599-201ENSMUST00000193067 489 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm37129-201ENSMUST00000195791 315 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm23452-201ENSMUST00000083327 107 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Snord33-201ENSMUST00000083694 84 ntBASIC0.32□□□□□ -2.36
Trav12-1A0N8R1 Gm26301-201ENSMUST00000104813 95 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm25325-201ENSMUST00000122559 86 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm24480-201ENSMUST00000157442 103 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm22163-201ENSMUST00000158408 135 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm26004-201ENSMUST00000158804 116 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Mir3473c-201ENSMUST00000175262 81 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm20874-201ENSMUST00000178356 663 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm24969-201ENSMUST00000180331 79 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Mir6540-201ENSMUST00000184886 108 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm9156-201ENSMUST00000189660 463 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm23370-201ENSMUST00000199545 130 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Gm29754-201ENSMUST00000206269 358 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Trav12-1A0N8R1 AA413626-201ENSMUST00000121125 494 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm26102-201ENSMUST00000157251 284 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm23605-201ENSMUST00000157255 127 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm24401-201ENSMUST00000157868 91 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm25901-201ENSMUST00000158494 130 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm22392-201ENSMUST00000177971 107 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Mir6364-201ENSMUST00000183396 86 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm27861-201ENSMUST00000183920 214 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm37693-201ENSMUST00000194562 234 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Gm25589-201ENSMUST00000082502 166 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Snord118-201ENSMUST00000082965 135 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Trav12-1A0N8R1 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.29□□□□□ -2.36
Trav12-1A0N8R1 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.29□□□□□ -2.36
Trav12-1A0N8R1 Gm22759-201ENSMUST00000102276 96 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms