Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm28474-201ENSMUST00000188501 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28569-201ENSMUST00000188748 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28120-201ENSMUST00000188812 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28369-201ENSMUST00000188993 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28537-201ENSMUST00000189026 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28861-201ENSMUST00000189681 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28717-201ENSMUST00000189950 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29180-201ENSMUST00000190003 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29631-201ENSMUST00000191065 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm28160-201ENSMUST00000191229 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm29469-201ENSMUST00000191448 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm37658-201ENSMUST00000192672 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm37129-201ENSMUST00000195791 315 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm43602-201ENSMUST00000196772 300 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm43680-201ENSMUST00000199466 340 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm44396-201ENSMUST00000199843 114 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm43897-201ENSMUST00000204019 309 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm45530-201ENSMUST00000211658 225 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 AC127371.3-201ENSMUST00000228129 415 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm26055-201ENSMUST00000083038 107 ntBASIC-0.09□□□□□ -2.42
Trav4-3A0A0B4J1K1 Gm14731-201ENSMUST00000119216 376 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm11785-201ENSMUST00000120165 601 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm15878-201ENSMUST00000127561 306 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm27396-201ENSMUST00000157708 58 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm22611-201ENSMUST00000158288 150 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm22776-201ENSMUST00000178634 94 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm23767-201ENSMUST00000179278 94 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm28408-201ENSMUST00000191557 463 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm43035-201ENSMUST00000197626 517 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm23370-201ENSMUST00000199545 130 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm20144-201ENSMUST00000203031 165 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm44609-201ENSMUST00000207157 460 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm45240-201ENSMUST00000211437 674 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC164161.1-201ENSMUST00000214076 639 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm40810-201ENSMUST00000219149 253 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC154562.1-201ENSMUST00000226140 966 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Mir411-201ENSMUST00000083543 82 ntBASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC-0.1□□□□□ -2.43
Trav4-3A0A0B4J1K1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm3563-201ENSMUST00000172963 1628 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm26301-201ENSMUST00000104813 95 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm12313-201ENSMUST00000121347 421 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm22389-201ENSMUST00000158193 301 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm44391-201ENSMUST00000198490 93 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm44404-201ENSMUST00000203979 636 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm31849-201ENSMUST00000220306 375 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm30738-201ENSMUST00000221346 502 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC132446.1-201ENSMUST00000222655 226 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm25257-201ENSMUST00000083907 110 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC127302.3-201ENSMUST00000215480 2791 ntBASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC-0.11□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm14657-201ENSMUST00000117461 302 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm12837-201ENSMUST00000120131 373 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm24668-201ENSMUST00000158935 104 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Mir5104-201ENSMUST00000175319 94 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm9830-201ENSMUST00000178509 357 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm19457-201ENSMUST00000200995 448 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC104832.1-201ENSMUST00000222938 550 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm25126-201ENSMUST00000083343 102 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm26166-201ENSMUST00000083788 107 ntBASIC-0.12□□□□□ -2.43
Trav4-3A0A0B4J1K1 Scarna8-201ENSMUST00000158333 131 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm22668-201ENSMUST00000158716 260 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm22403-201ENSMUST00000174919 84 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm9022-202ENSMUST00000183285 483 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm44358-201ENSMUST00000196301 98 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm44088-201ENSMUST00000204595 237 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm45101-201ENSMUST00000208327 232 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm45541-201ENSMUST00000210443 54 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC162387.1-201ENSMUST00000213369 213 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC173482.5-201ENSMUST00000224181 327 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC170810.3-201ENSMUST00000226177 374 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 AC166344.2-201ENSMUST00000226747 374 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm25357-201ENSMUST00000082745 72 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Mir224-201ENSMUST00000083608 82 ntBASIC-0.13□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm14852-201ENSMUST00000120065 647 ntBASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm44655-201ENSMUST00000207768 423 ntBASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Mir32-201ENSMUST00000083610 70 ntBASIC-0.14□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm13153-201ENSMUST00000120969 637 ntBASIC-0.15□□□□□ -2.43
Trav4-3A0A0B4J1K1 Gm20438-201ENSMUST00000174441 329 ntBASIC-0.15□□□□□ -2.43
Trav4-3A0A0B4J1K1 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC-0.15□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms