Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.03□□□□□ -2.09
Trav5-4A0A075B652 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Mir682-201ENSMUST00000102281 96 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Mir466k-201ENSMUST00000116774 122 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm6574-201ENSMUST00000120037 362 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm24480-201ENSMUST00000157442 103 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm15900-201ENSMUST00000161584 342 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm24810-201ENSMUST00000175317 70 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm28058-201ENSMUST00000186421 264 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trav5-4A0A075B652 Gm26396-201ENSMUST00000104093 132 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm15215-201ENSMUST00000117773 489 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm22538-201ENSMUST00000158169 299 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm24212-201ENSMUST00000158258 132 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm24771-201ENSMUST00000158508 137 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm3852-201ENSMUST00000182781 264 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm44482-201ENSMUST00000199232 103 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Mir7217-201ENSMUST00000200304 62 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm8031-201ENSMUST00000213430 626 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm22622-201ENSMUST00000082870 129 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Gm26175-201ENSMUST00000083794 131 ntBASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav5-4A0A075B652 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav5-4A0A075B652 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav5-4A0A075B652 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm25115-201ENSMUST00000157187 140 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm23660-201ENSMUST00000178362 79 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm24088-201ENSMUST00000179100 79 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm27249-201ENSMUST00000185049 328 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm28282-201ENSMUST00000186072 186 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm37377-201ENSMUST00000191733 304 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Ighv2-8-201ENSMUST00000193935 262 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm36953-201ENSMUST00000195295 268 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm44393-201ENSMUST00000197418 138 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm26314-201ENSMUST00000083891 107 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm38071-201ENSMUST00000195792 3378 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm37061-201ENSMUST00000195066 3243 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Gm14405-201ENSMUST00000117808 2330 ntBASIC2□□□□□ -2.09
Trav5-4A0A075B652 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm22073-201ENSMUST00000122668 189 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm24726-201ENSMUST00000158232 121 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Mir1927-201ENSMUST00000158579 109 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm26194-201ENSMUST00000175036 71 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm20613-201ENSMUST00000175828 345 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm27532-201ENSMUST00000183726 113 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm37845-201ENSMUST00000194977 355 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm44429-201ENSMUST00000203542 186 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm45119-201ENSMUST00000207612 199 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm45704-201ENSMUST00000212582 403 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Rny3-201ENSMUST00000083011 102 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 Gm26164-201ENSMUST00000083793 104 ntBASIC1.99□□□□□ -2.09
Trav5-4A0A075B652 AC152979.2-201ENSMUST00000219702 3814 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm22713-201ENSMUST00000116895 130 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm24896-201ENSMUST00000122741 135 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm24005-201ENSMUST00000158459 296 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm29005-201ENSMUST00000186773 320 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm28925-201ENSMUST00000188586 168 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm28414-201ENSMUST00000190111 294 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm44161-201ENSMUST00000203532 253 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav5-4A0A075B652 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm14296-202ENSMUST00000108931 750 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm14894-201ENSMUST00000117170 270 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm23983-201ENSMUST00000157142 114 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm24210-201ENSMUST00000158263 133 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm22435-201ENSMUST00000158552 128 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Mir6993-201ENSMUST00000184912 65 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm18291-201ENSMUST00000190791 301 ntBASIC1.97□□□□□ -2.09
Trav5-4A0A075B652 Gm37449-201ENSMUST00000193016 270 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 291.1 ms