Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm13439-201ENSMUST00000117541 409 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm15211-201ENSMUST00000118932 528 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm23331-201ENSMUST00000157423 108 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm22843-201ENSMUST00000157710 134 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm23779-201ENSMUST00000157938 64 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm24075-201ENSMUST00000158175 72 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm24005-201ENSMUST00000158459 296 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm43264-201ENSMUST00000202284 325 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 AC161426.1-201ENSMUST00000214137 286 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC2.86□□□□□ -1.95
Trim54Q9ERP3 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Mir496a-201ENSMUST00000093627 79 ntBASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
Trim54Q9ERP3 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm13518-201ENSMUST00000120018 233 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm26402-201ENSMUST00000158499 113 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm24736-201ENSMUST00000158862 130 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm5224-201ENSMUST00000183060 350 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm6060-201ENSMUST00000188671 251 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm37338-201ENSMUST00000191986 127 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm43286-201ENSMUST00000197420 424 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm43991-201ENSMUST00000203751 274 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm23041-201ENSMUST00000083868 106 ntBASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Trim54Q9ERP3 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm23142-201ENSMUST00000101848 105 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm26240-201ENSMUST00000101893 105 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm25529-201ENSMUST00000104850 92 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm15846-201ENSMUST00000116022 320 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm12837-201ENSMUST00000120131 373 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm22416-201ENSMUST00000158590 88 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm25119-201ENSMUST00000158815 88 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm22263-201ENSMUST00000180060 104 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm28579-201ENSMUST00000186143 369 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm20257-202ENSMUST00000188643 130 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm37923-201ENSMUST00000191624 161 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.84□□□□□ -1.95
Trim54Q9ERP3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.84□□□□□ -1.95
Trim54Q9ERP3 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
Trim54Q9ERP3 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.84□□□□□ -1.96
Trim54Q9ERP3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm12443-201ENSMUST00000122308 323 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm23895-201ENSMUST00000158108 160 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm24358-201ENSMUST00000158424 288 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm25476-201ENSMUST00000175125 185 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Snord53-201ENSMUST00000175146 78 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm21827-201ENSMUST00000178247 423 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm37162-201ENSMUST00000191708 551 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm45879-201ENSMUST00000212521 392 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm8940-201ENSMUST00000212585 219 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Gm23412-201ENSMUST00000083017 107 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.83□□□□□ -1.96
Trim54Q9ERP3 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm16533-201ENSMUST00000140035 228 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm22651-201ENSMUST00000157872 94 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm22382-201ENSMUST00000158185 130 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm25653-201ENSMUST00000158473 138 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Mir6405-201ENSMUST00000184584 124 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm29397-201ENSMUST00000185205 333 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm29658-201ENSMUST00000185404 230 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm37807-201ENSMUST00000194310 190 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm44337-201ENSMUST00000196553 114 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm44083-201ENSMUST00000203114 337 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm44459-201ENSMUST00000203926 160 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm44858-201ENSMUST00000207360 154 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Trim54Q9ERP3 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.82□□□□□ -1.96
Trim54Q9ERP3 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms