Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22217-201ENSMUST00000157556 313 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Snord13-201ENSMUST00000157627 104 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm16588-201ENSMUST00000162889 355 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Mir7039-201ENSMUST00000183852 85 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm37361-201ENSMUST00000194345 132 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm43723-201ENSMUST00000196886 189 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm43529-201ENSMUST00000199178 412 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm44128-201ENSMUST00000204909 219 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm44666-201ENSMUST00000208544 391 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24624-201ENSMUST00000082617 164 ntBASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Ccdc3Q9D6Y1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm14013-201ENSMUST00000119006 270 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm14835-201ENSMUST00000119039 315 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm13368-201ENSMUST00000122443 430 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22817-201ENSMUST00000157448 356 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22597-201ENSMUST00000157602 80 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25035-201ENSMUST00000175414 77 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24306-201ENSMUST00000180229 79 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm10193-201ENSMUST00000188288 231 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm42164-201ENSMUST00000198881 379 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm43680-201ENSMUST00000199466 340 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm18774-201ENSMUST00000218269 601 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22508-201ENSMUST00000082772 110 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.31□□□□□ -2.2
Ccdc3Q9D6Y1 Gm381-201ENSMUST00000117443 2037 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Mir223-201ENSMUST00000102112 110 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm26377-201ENSMUST00000102184 108 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25274-201ENSMUST00000104296 135 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm26301-201ENSMUST00000104813 95 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm4732-201ENSMUST00000118778 473 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23829-201ENSMUST00000157392 270 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23328-201ENSMUST00000157418 132 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23760-201ENSMUST00000158350 116 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22768-201ENSMUST00000158366 153 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22076-201ENSMUST00000158601 84 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23777-201ENSMUST00000158994 259 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22633-201ENSMUST00000179834 107 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm43583-201ENSMUST00000199235 303 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm43004-201ENSMUST00000201872 703 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22578-201ENSMUST00000083730 107 ntBASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22780-201ENSMUST00000104084 132 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm12309-201ENSMUST00000119889 182 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23983-201ENSMUST00000157142 114 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22818-201ENSMUST00000157446 104 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22338-201ENSMUST00000157715 129 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23083-201ENSMUST00000157851 116 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24419-201ENSMUST00000157875 332 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25976-201ENSMUST00000158695 130 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22800-201ENSMUST00000175627 94 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24388-201ENSMUST00000177872 107 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Mir3961-201ENSMUST00000198795 59 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm44135-201ENSMUST00000205221 368 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22299-201ENSMUST00000082663 136 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25582-201ENSMUST00000083412 110 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23100-201ENSMUST00000083455 141 ntBASIC1.29□□□□□ -2.2
Ccdc3Q9D6Y1 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22003-201ENSMUST00000101885 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22591-201ENSMUST00000104243 106 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm14678-201ENSMUST00000121396 482 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25115-201ENSMUST00000157187 140 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24768-201ENSMUST00000158512 94 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24540-201ENSMUST00000177627 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25256-201ENSMUST00000177746 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22822-201ENSMUST00000177941 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Rnu6-201ENSMUST00000178023 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24753-201ENSMUST00000178183 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25829-201ENSMUST00000178275 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22092-201ENSMUST00000178290 107 ntBASIC1.28□□□□□ -2.2
Ccdc3Q9D6Y1 Gm24486-201ENSMUST00000178420 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms