Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm24174-201ENSMUST00000158933 111 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm16584-201ENSMUST00000159267 189 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm23144-201ENSMUST00000180226 107 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Mir6388-201ENSMUST00000184417 75 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm29134-201ENSMUST00000186579 126 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm28337-201ENSMUST00000190425 666 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm37923-201ENSMUST00000191624 161 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm31123-201ENSMUST00000192094 666 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm38333-201ENSMUST00000193608 604 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm9402-201ENSMUST00000196849 388 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Use1Q9CQ56 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm25421-201ENSMUST00000104218 164 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm6956-201ENSMUST00000134724 546 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm22227-201ENSMUST00000157356 259 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm23858-201ENSMUST00000158384 106 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm20613-201ENSMUST00000175828 345 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm21754-201ENSMUST00000177550 479 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.44□□□□□ -2.18
Use1Q9CQ56 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.44□□□□□ -2.18
Use1Q9CQ56 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.44□□□□□ -2.18
Use1Q9CQ56 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Use1Q9CQ56 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Use1Q9CQ56 Mir669d-201ENSMUST00000104644 121 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm15861-201ENSMUST00000120979 339 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm22793-201ENSMUST00000157227 330 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm22963-201ENSMUST00000157960 91 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Use1Q9CQ56 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm25936-201ENSMUST00000179952 114 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm27490-201ENSMUST00000184754 128 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm43739-201ENSMUST00000198294 307 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Use1Q9CQ56 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm26922-201ENSMUST00000082687 72 ntBASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Use1Q9CQ56 Gm13432-201ENSMUST00000118861 241 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm13804-201ENSMUST00000119552 172 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm15719-201ENSMUST00000120619 635 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm24677-201ENSMUST00000158755 150 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm23025-201ENSMUST00000158769 111 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm23777-201ENSMUST00000158994 259 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Mir3057-201ENSMUST00000175040 91 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm25956-201ENSMUST00000175115 217 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm25707-201ENSMUST00000175120 96 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Mir7226-201ENSMUST00000184953 60 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm44655-201ENSMUST00000207768 423 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.42□□□□□ -2.18
Use1Q9CQ56 Gm16976-205ENSMUST00000227324 226 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 Mir148b-201ENSMUST00000083626 97 ntBASIC1.42□□□□□ -2.18
Use1Q9CQ56 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Use1Q9CQ56 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Use1Q9CQ56 Mir653-201ENSMUST00000102402 85 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Mir758-201ENSMUST00000103260 81 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm13439-201ENSMUST00000117541 409 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm12639-201ENSMUST00000121400 493 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm24895-201ENSMUST00000122742 74 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm23000-201ENSMUST00000157083 139 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm22817-201ENSMUST00000157448 356 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm24851-201ENSMUST00000158028 103 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.41□□□□□ -2.18
Use1Q9CQ56 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Use1Q9CQ56 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Use1Q9CQ56 Gm23453-201ENSMUST00000083326 106 ntBASIC1.41□□□□□ -2.18
Use1Q9CQ56 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Use1Q9CQ56 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm22761-201ENSMUST00000102278 96 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm12806-201ENSMUST00000119384 268 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm15115-201ENSMUST00000121145 264 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm25269-201ENSMUST00000122601 104 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm18417-201ENSMUST00000176564 648 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm23090-201ENSMUST00000177331 78 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm22862-201ENSMUST00000178593 121 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm27517-201ENSMUST00000184347 236 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.4□□□□□ -2.19
Use1Q9CQ56 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.4□□□□□ -2.19
Use1Q9CQ56 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.4□□□□□ -2.19
Use1Q9CQ56 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.4□□□□□ -2.19
Use1Q9CQ56 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.4□□□□□ -2.19
Use1Q9CQ56 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms