Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm24053-201ENSMUST00000158620 105 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 Gm27585-201ENSMUST00000183717 199 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 Mir384-201ENSMUST00000083565 88 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 Gm25630-201ENSMUST00000084000 162 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 Gm10360-201ENSMUST00000097219 272 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Clp1Q99LI9 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.93□□□□□ -1.78
Clp1Q99LI9 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.93□□□□□ -1.78
Clp1Q99LI9 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Clp1Q99LI9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Clp1Q99LI9 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Clp1Q99LI9 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Clp1Q99LI9 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
Clp1Q99LI9 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm23322-201ENSMUST00000104464 167 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm14586-201ENSMUST00000119571 408 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm12412-201ENSMUST00000121867 328 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm27592-201ENSMUST00000157729 126 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm22174-201ENSMUST00000175050 125 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm22692-201ENSMUST00000175055 125 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm27634-201ENSMUST00000175060 126 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm26460-201ENSMUST00000175061 126 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm22460-201ENSMUST00000175269 124 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm24365-201ENSMUST00000175384 125 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm44310-201ENSMUST00000175424 126 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm22639-201ENSMUST00000175591 125 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm24979-201ENSMUST00000178626 126 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm4479-201ENSMUST00000178807 171 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm27743-201ENSMUST00000185136 126 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm19366-201ENSMUST00000206996 156 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm24355-201ENSMUST00000082858 122 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.92□□□□□ -1.78
Clp1Q99LI9 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.92□□□□□ -1.78
Clp1Q99LI9 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Clp1Q99LI9 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.91□□□□□ -1.78
Clp1Q99LI9 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Clp1Q99LI9 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Clp1Q99LI9 Gm12351-201ENSMUST00000118727 292 ntBASIC3.91□□□□□ -1.78
Clp1Q99LI9 Gm25456-201ENSMUST00000157952 109 ntBASIC3.91□□□□□ -1.78
Clp1Q99LI9 Gm27285-201ENSMUST00000183875 127 ntBASIC3.91□□□□□ -1.78
Clp1Q99LI9 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Clp1Q99LI9 Gm36189-201ENSMUST00000204113 523 ntBASIC3.91□□□□□ -1.78
Clp1Q99LI9 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.91□□□□□ -1.78
Clp1Q99LI9 Mir302d-201ENSMUST00000083513 66 ntBASIC3.91□□□□□ -1.78
Clp1Q99LI9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
Clp1Q99LI9 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Clp1Q99LI9 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Clp1Q99LI9 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Clp1Q99LI9 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Clp1Q99LI9 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm13345-201ENSMUST00000121928 228 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm25625-201ENSMUST00000157221 96 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm25424-201ENSMUST00000157612 58 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm25914-201ENSMUST00000157618 153 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm22382-201ENSMUST00000158185 130 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm24106-201ENSMUST00000175498 127 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm25457-201ENSMUST00000179509 107 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm42834-201ENSMUST00000196845 256 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm43239-201ENSMUST00000200131 201 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Gm22299-201ENSMUST00000082663 136 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Mir28a-201ENSMUST00000083560 86 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 AF357428-201ENSMUST00000083815 69 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Clp1Q99LI9 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Clp1Q99LI9 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Clp1Q99LI9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Clp1Q99LI9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.9□□□□□ -1.79
Clp1Q99LI9 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Clp1Q99LI9 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm22270-201ENSMUST00000104034 132 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm24627-201ENSMUST00000122764 138 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm23152-201ENSMUST00000175322 116 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm26265-202ENSMUST00000196326 133 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm44084-201ENSMUST00000203947 409 ntBASIC3.89□□□□□ -1.79
Clp1Q99LI9 Gm44600-201ENSMUST00000208540 111 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms