Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Mir8103-201ENSMUST00000183945 107 ntBASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Gm25401-201ENSMUST00000082975 106 ntBASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Gm22294-201ENSMUST00000083308 104 ntBASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Pcdhb4Q91XZ6 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm9009-201ENSMUST00000117321 326 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm14971-201ENSMUST00000117980 663 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm5937-201ENSMUST00000119715 643 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm26100-201ENSMUST00000157245 127 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Mir7667-201ENSMUST00000183866 63 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm23925-201ENSMUST00000082471 132 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm24147-201ENSMUST00000082763 144 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm23738-201ENSMUST00000082828 171 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Gm25482-201ENSMUST00000083225 107 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.11□□□□□ -1.91
Pcdhb4Q91XZ6 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm23705-201ENSMUST00000104370 130 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm11356-201ENSMUST00000118974 192 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm6762-201ENSMUST00000121769 289 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm25454-201ENSMUST00000157947 315 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm22433-201ENSMUST00000158550 142 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm23476-201ENSMUST00000158881 274 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm25939-201ENSMUST00000179876 191 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Pcdhb4Q91XZ6 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Mir291a-201ENSMUST00000104815 82 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm23841-201ENSMUST00000116951 114 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm14803-201ENSMUST00000117163 361 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm12458-201ENSMUST00000119387 495 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm12276-201ENSMUST00000121709 301 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm22027-201ENSMUST00000122737 127 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm23326-201ENSMUST00000157419 105 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm22380-201ENSMUST00000157479 95 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm23640-201ENSMUST00000157860 104 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm25470-201ENSMUST00000175576 111 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Mir3068-202ENSMUST00000197755 79 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm44084-201ENSMUST00000203947 409 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm24533-201ENSMUST00000083138 196 ntBASIC3.09□□□□□ -1.91
Pcdhb4Q91XZ6 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.09□□□□□ -1.92
Pcdhb4Q91XZ6 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.09□□□□□ -1.92
Pcdhb4Q91XZ6 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm24116-201ENSMUST00000103975 107 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm16171-201ENSMUST00000118004 324 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm14845-201ENSMUST00000121259 306 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm25664-201ENSMUST00000157697 107 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm23892-201ENSMUST00000158105 130 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm20660-201ENSMUST00000177515 289 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm23864-201ENSMUST00000177607 107 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm7958-201ENSMUST00000178255 468 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm7950-201ENSMUST00000179633 468 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Mir6402-201ENSMUST00000183406 80 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm27796-201ENSMUST00000183863 261 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Mir8096-201ENSMUST00000184526 127 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm29262-201ENSMUST00000190084 196 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Mir465d-201ENSMUST00000196314 58 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm44429-201ENSMUST00000203542 186 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.08□□□□□ -1.92
Pcdhb4Q91XZ6 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms