Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm25853-201ENSMUST00000082793 132 ntBASIC1.52□□□□□ -2.17
Chrna3Q8R4G9 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Chrna3Q8R4G9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Chrna3Q8R4G9 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Gm14785-201ENSMUST00000120185 539 ntBASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Gm20477-201ENSMUST00000174028 280 ntBASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Gm44449-201ENSMUST00000203610 153 ntBASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.51□□□□□ -2.17
Chrna3Q8R4G9 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm24598-201ENSMUST00000122510 74 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm24480-201ENSMUST00000157442 103 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm24862-201ENSMUST00000179103 79 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm23310-201ENSMUST00000179105 79 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm25461-201ENSMUST00000179293 79 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Mir7009-201ENSMUST00000184519 64 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm43914-201ENSMUST00000203592 594 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm45365-201ENSMUST00000209489 256 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Gm22577-201ENSMUST00000083731 109 ntBASIC1.5□□□□□ -2.17
Chrna3Q8R4G9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Mir190b-201ENSMUST00000104803 80 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm23718-201ENSMUST00000157350 307 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm23589-201ENSMUST00000157660 105 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm22315-201ENSMUST00000158010 143 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm7925-201ENSMUST00000166690 401 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm23145-201ENSMUST00000178912 79 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm28453-203ENSMUST00000187041 189 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm33866-201ENSMUST00000196911 289 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Chrna3Q8R4G9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm24079-201ENSMUST00000104352 132 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm22851-201ENSMUST00000178741 94 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm25074-201ENSMUST00000178782 94 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm7258-201ENSMUST00000179317 300 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm28151-201ENSMUST00000189404 951 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm37727-201ENSMUST00000191637 819 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm18971-201ENSMUST00000197240 374 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Trav15d-3-201ENSMUST00000198604 167 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm44990-201ENSMUST00000203922 217 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm44910-201ENSMUST00000208451 396 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm2628-201ENSMUST00000218019 426 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Chrna3Q8R4G9 Gm24889-201ENSMUST00000104388 132 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm12053-201ENSMUST00000119022 252 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm15266-201ENSMUST00000119635 255 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm24892-201ENSMUST00000122747 104 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm23558-201ENSMUST00000157823 80 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.47□□□□□ -2.17
Chrna3Q8R4G9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms