Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ushbp1Q8R370 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gm11356-201ENSMUST00000118974 192 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gm11414-201ENSMUST00000121795 263 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gm26024-201ENSMUST00000158657 322 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gm24348-201ENSMUST00000158710 130 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gm44399-201ENSMUST00000205043 226 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gm44853-201ENSMUST00000209070 250 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Gm44230-201ENSMUST00000203032 3550 ntBASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ushbp1Q8R370 Mir878-201ENSMUST00000104680 78 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Mir1942-201ENSMUST00000157274 63 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm23713-201ENSMUST00000157353 70 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm23559-201ENSMUST00000157824 103 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm22654-201ENSMUST00000157874 105 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm24997-201ENSMUST00000157910 105 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm22615-201ENSMUST00000158102 70 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm23474-201ENSMUST00000158884 75 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm22308-201ENSMUST00000177609 107 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm37746-201ENSMUST00000193249 198 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm46233-201ENSMUST00000217831 449 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm22997-201ENSMUST00000082845 107 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm22685-201ENSMUST00000082848 106 ntBASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ushbp1Q8R370 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm14971-201ENSMUST00000117980 663 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm15733-201ENSMUST00000132957 242 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm17522-201ENSMUST00000178144 498 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Mir6402-201ENSMUST00000183406 80 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm45150-201ENSMUST00000206051 467 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm30534-201ENSMUST00000217928 207 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm10298-201ENSMUST00000074801 265 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Snord14d-201ENSMUST00000083424 86 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Ushbp1Q8R370 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ushbp1Q8R370 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ushbp1Q8R370 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ushbp1Q8R370 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ushbp1Q8R370 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Ushbp1Q8R370 Gm24338-201ENSMUST00000104205 127 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 n-R5s67-201ENSMUST00000104336 114 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm24890-201ENSMUST00000104389 102 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm23829-201ENSMUST00000157392 270 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm24958-201ENSMUST00000158009 97 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm22664-201ENSMUST00000158719 105 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm25450-201ENSMUST00000179144 107 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm24350-202ENSMUST00000198309 132 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm32222-201ENSMUST00000203296 298 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm23625-201ENSMUST00000082457 100 ntBASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Ushbp1Q8R370 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ushbp1Q8R370 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm15002-201ENSMUST00000118406 452 ntBASIC3.39□□□□□ -1.87
Ushbp1Q8R370 Gm12934-201ENSMUST00000119221 343 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 267.9 ms