Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.34□□□□□ -1.87
Vps53Q8CCB4 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC3.34□□□□□ -1.87
Vps53Q8CCB4 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC3.34□□□□□ -1.87
Vps53Q8CCB4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.34□□□□□ -1.87
Vps53Q8CCB4 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.34□□□□□ -1.87
Vps53Q8CCB4 Gm25410-201ENSMUST00000083758 137 ntBASIC3.34□□□□□ -1.87
Vps53Q8CCB4 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vps53Q8CCB4 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Vps53Q8CCB4 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm24172-201ENSMUST00000104127 117 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm15526-201ENSMUST00000112504 204 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm22225-201ENSMUST00000157358 278 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm25384-201ENSMUST00000157807 105 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm22654-201ENSMUST00000157874 105 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm22011-201ENSMUST00000158790 123 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm22308-201ENSMUST00000177609 107 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm28650-201ENSMUST00000188413 411 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm22997-201ENSMUST00000082845 107 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Vps53Q8CCB4 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm22779-201ENSMUST00000104085 107 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm24338-201ENSMUST00000104205 127 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Mir875-201ENSMUST00000104698 78 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm13581-201ENSMUST00000120675 278 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm26275-201ENSMUST00000157101 268 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm24959-201ENSMUST00000157924 146 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm24487-201ENSMUST00000178017 63 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm20257-202ENSMUST00000188643 130 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm44960-201ENSMUST00000207403 141 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Gm23517-201ENSMUST00000082830 192 ntBASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Vps53Q8CCB4 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm14792-201ENSMUST00000119725 258 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm24909-201ENSMUST00000157290 280 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm22853-201ENSMUST00000174974 131 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm22621-201ENSMUST00000179678 74 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Mir8103-201ENSMUST00000183945 107 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm44473-201ENSMUST00000204039 152 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm45296-201ENSMUST00000209625 205 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm4945-201ENSMUST00000075152 453 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Gm26166-201ENSMUST00000083788 107 ntBASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Vps53Q8CCB4 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm25728-201ENSMUST00000104525 159 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm23911-201ENSMUST00000104596 134 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm14774-201ENSMUST00000117857 536 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm13967-201ENSMUST00000120404 380 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm22814-201ENSMUST00000157452 104 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm27579-201ENSMUST00000158113 63 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm24729-201ENSMUST00000158225 137 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm17100-201ENSMUST00000168963 272 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm27747-201ENSMUST00000184707 85 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm29553-201ENSMUST00000189692 279 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Gm7871-201ENSMUST00000195346 618 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Vps53Q8CCB4 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Mir499-201ENSMUST00000102357 79 ntBASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Gm25565-201ENSMUST00000104605 105 ntBASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Gm14448-201ENSMUST00000116383 210 ntBASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Gm15282-201ENSMUST00000117707 300 ntBASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Gm26256-201ENSMUST00000122499 186 ntBASIC3.29□□□□□ -1.88
Vps53Q8CCB4 Gm23886-201ENSMUST00000122684 313 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 964 ms