Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 AC134601.1-201ENSMUST00000221058 109 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 AL590503.1-201ENSMUST00000222053 321 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm3829-201ENSMUST00000222362 619 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm24355-201ENSMUST00000082858 122 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Trim47Q8C0E3 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm44114-201ENSMUST00000203270 2727 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm22036-201ENSMUST00000157279 215 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm25456-201ENSMUST00000157952 109 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm22708-201ENSMUST00000158987 103 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm25817-201ENSMUST00000177758 121 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm24766-201ENSMUST00000179182 121 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm25253-201ENSMUST00000179958 107 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm37001-201ENSMUST00000193377 190 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Gm22055-201ENSMUST00000083388 107 ntBASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim47Q8C0E3 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm22779-201ENSMUST00000104085 107 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm24232-201ENSMUST00000104314 132 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm14649-201ENSMUST00000121814 324 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm26276-201ENSMUST00000157099 109 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm25391-201ENSMUST00000157342 134 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm28000-201ENSMUST00000184380 85 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Gm4036-201ENSMUST00000220842 626 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Snord14d-201ENSMUST00000083424 86 ntBASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
Trim47Q8C0E3 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm23063-201ENSMUST00000102350 93 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm22472-201ENSMUST00000104115 134 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm15861-201ENSMUST00000120979 339 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm25572-201ENSMUST00000157527 172 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm10292-201ENSMUST00000183142 581 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Mir6383-201ENSMUST00000184545 116 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm43680-201ENSMUST00000199466 340 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Gm25797-201ENSMUST00000082640 107 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Mir28a-201ENSMUST00000083560 86 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Trim47Q8C0E3 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm12934-201ENSMUST00000119221 343 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm6025-201ENSMUST00000121517 201 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm23655-201ENSMUST00000122627 105 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm25623-201ENSMUST00000157216 108 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm22558-201ENSMUST00000157326 95 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm26084-201ENSMUST00000157903 104 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm24553-201ENSMUST00000158653 131 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm20438-201ENSMUST00000174441 329 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm44308-201ENSMUST00000197080 99 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm44429-201ENSMUST00000203542 186 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm37061-201ENSMUST00000195066 3243 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.28□□□□□ -1.72
Trim47Q8C0E3 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms