Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim35Q8C006 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim35Q8C006 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Trim35Q8C006 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Trim35Q8C006 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Trim35Q8C006 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Trim35Q8C006 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm7840-201ENSMUST00000122086 533 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm24846-201ENSMUST00000158033 108 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm22529-201ENSMUST00000158817 123 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm27686-201ENSMUST00000185123 91 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm42451-201ENSMUST00000197410 244 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm44330-201ENSMUST00000200106 143 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 AC153553.1-201ENSMUST00000218257 684 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Mir31-201ENSMUST00000083474 106 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm42448-201ENSMUST00000197122 2644 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Gm44578-201ENSMUST00000207236 3835 ntBASIC5.03□□□□□ -1.6
Trim35Q8C006 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim35Q8C006 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim35Q8C006 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC5.02□□□□□ -1.61
Trim35Q8C006 Gm22957-201ENSMUST00000122511 123 ntBASIC5.02□□□□□ -1.61
Trim35Q8C006 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Gm23965-201ENSMUST00000157969 142 ntBASIC5.02□□□□□ -1.61
Trim35Q8C006 Gm22163-201ENSMUST00000158408 135 ntBASIC5.02□□□□□ -1.61
Trim35Q8C006 Gm9442-201ENSMUST00000194242 319 ntBASIC5.02□□□□□ -1.61
Trim35Q8C006 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.02□□□□□ -1.61
Trim35Q8C006 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Trim35Q8C006 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim35Q8C006 Gm37562-201ENSMUST00000194763 4328 ntBASIC5.02□□□□□ -1.61
Trim35Q8C006 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Trim35Q8C006 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim35Q8C006 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim35Q8C006 AC133076.2-201ENSMUST00000227678 3532 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm24281-201ENSMUST00000104234 136 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 n-R5s39-201ENSMUST00000122613 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm24250-201ENSMUST00000157320 135 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm25369-201ENSMUST00000158848 132 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm25160-201ENSMUST00000158914 102 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm23770-201ENSMUST00000178009 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm22832-201ENSMUST00000178022 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm23863-201ENSMUST00000178265 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm23933-201ENSMUST00000178405 79 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm24828-201ENSMUST00000178507 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm23052-201ENSMUST00000178633 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm26435-201ENSMUST00000179026 107 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm25729-201ENSMUST00000179050 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm25359-201ENSMUST00000179315 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm22624-201ENSMUST00000179913 108 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 AC161054.1-201ENSMUST00000214319 184 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 AC123064.1-201ENSMUST00000218950 406 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim35Q8C006 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim35Q8C006 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim35Q8C006 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim35Q8C006 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.01□□□□□ -1.61
Trim35Q8C006 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim35Q8C006 Gm38020-201ENSMUST00000193066 4676 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim35Q8C006 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim35Q8C006 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim35Q8C006 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Trim35Q8C006 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim35Q8C006 Mir879-201ENSMUST00000104703 76 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim35Q8C006 Gm15772-201ENSMUST00000118533 438 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Gm16345-201ENSMUST00000146065 158 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Gm23354-201ENSMUST00000158426 104 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Mir6344-201ENSMUST00000183462 104 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Mir7006-201ENSMUST00000183624 69 ntBASIC5□□□□□ -1.61
Trim35Q8C006 AC154374.1-201ENSMUST00000215351 351 ntBASIC5□□□□□ -1.61
Trim35Q8C006 n-R5s182-201ENSMUST00000083889 107 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Gm43654-201ENSMUST00000200664 3417 ntBASIC5□□□□□ -1.61
Trim35Q8C006 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC5□□□□□ -1.61
Trim35Q8C006 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
Trim35Q8C006 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim35Q8C006 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim35Q8C006 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim35Q8C006 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.99□□□□□ -1.61
Trim35Q8C006 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim35Q8C006 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim35Q8C006 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.99□□□□□ -1.61
Trim35Q8C006 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC4.99□□□□□ -1.61
Trim35Q8C006 Gm25383-201ENSMUST00000157810 144 ntBASIC4.99□□□□□ -1.61
Trim35Q8C006 Gm23065-201ENSMUST00000158236 130 ntBASIC4.99□□□□□ -1.61
Trim35Q8C006 Gm4468-201ENSMUST00000170206 294 ntBASIC4.99□□□□□ -1.61
Trim35Q8C006 Mir5103-201ENSMUST00000175111 79 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms