Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Trim56Q80VI1 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.94□□□□□ -1.78
Trim56Q80VI1 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm26387-201ENSMUST00000104238 132 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm26100-201ENSMUST00000157245 127 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm22108-201ENSMUST00000177961 106 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm25935-201ENSMUST00000178746 107 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm24798-201ENSMUST00000179334 106 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm36189-201ENSMUST00000204113 523 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm22739-201ENSMUST00000083437 160 ntBASIC3.93□□□□□ -1.78
Trim56Q80VI1 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Trim56Q80VI1 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim56Q80VI1 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim56Q80VI1 Mir466p-201ENSMUST00000103925 89 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm24118-201ENSMUST00000103972 126 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm25879-201ENSMUST00000104330 107 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm23990-201ENSMUST00000117031 117 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm14687-201ENSMUST00000120206 363 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm6079-201ENSMUST00000121356 404 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm28828-201ENSMUST00000186601 696 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm9765-201ENSMUST00000043170 321 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Mir302d-201ENSMUST00000083513 66 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Gm23039-201ENSMUST00000083870 161 ntBASIC3.92□□□□□ -1.78
Trim56Q80VI1 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim56Q80VI1 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trim56Q80VI1 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm24982-201ENSMUST00000104456 132 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm14518-201ENSMUST00000117351 542 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm12304-201ENSMUST00000120312 385 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm14402-201ENSMUST00000122217 508 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm23584-201ENSMUST00000157655 129 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm18015-201ENSMUST00000214879 316 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm25930-201ENSMUST00000082785 107 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim56Q80VI1 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim56Q80VI1 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.91□□□□□ -1.78
Trim56Q80VI1 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Trim56Q80VI1 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim56Q80VI1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Trim56Q80VI1 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
Trim56Q80VI1 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trim56Q80VI1 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim56Q80VI1 Gm24730-201ENSMUST00000158228 117 ntBASIC3.9□□□□□ -1.79
Trim56Q80VI1 Gm24930-201ENSMUST00000158315 83 ntBASIC3.9□□□□□ -1.79
Trim56Q80VI1 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim56Q80VI1 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.9□□□□□ -1.79
Trim56Q80VI1 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.9□□□□□ -1.79
Trim56Q80VI1 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim56Q80VI1 Gm44429-201ENSMUST00000203542 186 ntBASIC3.9□□□□□ -1.79
Trim56Q80VI1 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.9□□□□□ -1.79
Trim56Q80VI1 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim56Q80VI1 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.9□□□□□ -1.79
Trim56Q80VI1 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.9□□□□□ -1.79
Trim56Q80VI1 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim56Q80VI1 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.9□□□□□ -1.79
Trim56Q80VI1 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim56Q80VI1 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim56Q80VI1 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm23609-201ENSMUST00000104542 127 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm6762-201ENSMUST00000121769 289 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm25107-201ENSMUST00000122472 129 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm24676-201ENSMUST00000158758 75 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm18486-201ENSMUST00000184040 298 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm27753-201ENSMUST00000184742 203 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm29574-201ENSMUST00000186226 696 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm28159-201ENSMUST00000190296 696 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm43746-201ENSMUST00000200028 317 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.89□□□□□ -1.79
Trim56Q80VI1 Gm19244-201ENSMUST00000204340 253 ntBASIC3.89□□□□□ -1.79
Trim56Q80VI1 AC166113.1-201ENSMUST00000225258 475 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms