Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Snord82-201ENSMUST00000082889 70 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm23136-201ENSMUST00000083425 99 ntBASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Shkbp1Q6P7W2 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm24605-201ENSMUST00000104772 96 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm23990-201ENSMUST00000117031 117 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm16354-201ENSMUST00000155376 150 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm22561-201ENSMUST00000157331 84 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm17186-201ENSMUST00000171742 456 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm5967-201ENSMUST00000172723 494 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm23571-201ENSMUST00000180073 127 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm7909-201ENSMUST00000182688 614 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm18486-201ENSMUST00000184040 298 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm30341-201ENSMUST00000194363 289 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm6796-201ENSMUST00000211919 243 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm7065-201ENSMUST00000222150 474 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm22247-201ENSMUST00000082476 131 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm24948-201ENSMUST00000082866 207 ntBASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Shkbp1Q6P7W2 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm12793-201ENSMUST00000119268 292 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm14782-201ENSMUST00000120151 195 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm26026-201ENSMUST00000122726 123 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm24787-201ENSMUST00000157380 123 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm24997-201ENSMUST00000157910 105 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm23196-201ENSMUST00000158806 107 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm26061-201ENSMUST00000175584 108 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm24799-201ENSMUST00000178431 79 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm27952-201ENSMUST00000184748 105 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm37081-201ENSMUST00000192034 196 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm7182-201ENSMUST00000193351 732 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm44481-201ENSMUST00000197288 84 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm44339-201ENSMUST00000200598 84 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm30674-201ENSMUST00000214523 392 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm22294-201ENSMUST00000083308 104 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm25896-201ENSMUST00000083713 136 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.31□□□□□ -1.88
Shkbp1Q6P7W2 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm14803-201ENSMUST00000117163 361 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm24308-201ENSMUST00000177773 114 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm27470-201ENSMUST00000184070 210 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Mir7081-201ENSMUST00000184490 75 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Mir6383-201ENSMUST00000184545 116 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm28282-201ENSMUST00000186072 186 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Mir465d-201ENSMUST00000196314 58 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm44922-201ENSMUST00000206690 90 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm45907-201ENSMUST00000213023 193 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm18441-201ENSMUST00000223539 617 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm22304-201ENSMUST00000082688 129 ntBASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Shkbp1Q6P7W2 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Mir294-201ENSMUST00000104710 84 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm11819-201ENSMUST00000122192 372 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm11204-201ENSMUST00000122438 147 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm22026-201ENSMUST00000122735 281 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm27535-201ENSMUST00000183814 157 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Mir7062-201ENSMUST00000185038 66 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm18433-202ENSMUST00000195682 196 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm43704-201ENSMUST00000196164 496 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm36189-201ENSMUST00000204113 523 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm18213-201ENSMUST00000207850 178 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm24410-201ENSMUST00000083433 107 ntBASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Shkbp1Q6P7W2 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 180 ms