Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.92□□□□□ -1.78
Best3Q6H1V1 Gm25392-201ENSMUST00000157335 297 ntBASIC3.92□□□□□ -1.78
Best3Q6H1V1 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.92□□□□□ -1.78
Best3Q6H1V1 Gm27582-201ENSMUST00000184084 126 ntBASIC3.92□□□□□ -1.78
Best3Q6H1V1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.92□□□□□ -1.78
Best3Q6H1V1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.92□□□□□ -1.78
Best3Q6H1V1 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.92□□□□□ -1.78
Best3Q6H1V1 Gm24817-201ENSMUST00000093672 105 ntBASIC3.92□□□□□ -1.78
Best3Q6H1V1 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.91□□□□□ -1.78
Best3Q6H1V1 Gm22939-201ENSMUST00000103958 131 ntBASIC3.91□□□□□ -1.78
Best3Q6H1V1 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.91□□□□□ -1.78
Best3Q6H1V1 Mir6914-201ENSMUST00000184999 69 ntBASIC3.91□□□□□ -1.78
Best3Q6H1V1 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.91□□□□□ -1.78
Best3Q6H1V1 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Best3Q6H1V1 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.91□□□□□ -1.78
Best3Q6H1V1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC3.91□□□□□ -1.78
Best3Q6H1V1 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.91□□□□□ -1.78
Best3Q6H1V1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm14782-201ENSMUST00000120151 195 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm16021-201ENSMUST00000121176 219 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm22538-201ENSMUST00000158169 299 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm22382-201ENSMUST00000158185 130 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm28282-201ENSMUST00000186072 186 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm29574-201ENSMUST00000186226 696 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm28159-201ENSMUST00000190296 696 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Mir465d-201ENSMUST00000196314 58 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.9□□□□□ -1.79
Best3Q6H1V1 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Gm25410-201ENSMUST00000083758 137 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Best3Q6H1V1 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Best3Q6H1V1 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.9□□□□□ -1.79
Best3Q6H1V1 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm26423-201ENSMUST00000104277 128 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm14803-201ENSMUST00000117163 361 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm15282-201ENSMUST00000117707 300 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm15497-201ENSMUST00000119137 551 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm12686-201ENSMUST00000120546 397 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm22187-201ENSMUST00000157819 129 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm24415-201ENSMUST00000180218 107 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm45031-201ENSMUST00000206800 288 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm23247-201ENSMUST00000083373 107 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.89□□□□□ -1.79
Best3Q6H1V1 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Best3Q6H1V1 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Best3Q6H1V1 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Best3Q6H1V1 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.89□□□□□ -1.79
Best3Q6H1V1 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Best3Q6H1V1 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm24423-201ENSMUST00000101982 106 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm23013-201ENSMUST00000104146 106 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Mir291a-201ENSMUST00000104815 82 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Mir1b-201ENSMUST00000117012 122 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm13504-201ENSMUST00000117490 316 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm14971-201ENSMUST00000117980 663 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm22984-201ENSMUST00000122751 122 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm25373-201ENSMUST00000158156 115 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm25749-201ENSMUST00000175485 111 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm26297-201ENSMUST00000179464 132 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm27545-201ENSMUST00000184755 202 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm29167-201ENSMUST00000190024 377 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC3.88□□□□□ -1.79
Best3Q6H1V1 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.88□□□□□ -1.79
Best3Q6H1V1 AC158597.1-201ENSMUST00000216234 150 ntBASIC3.88□□□□□ -1.79
Best3Q6H1V1 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Best3Q6H1V1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Best3Q6H1V1 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Best3Q6H1V1 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.87□□□□□ -1.79
Best3Q6H1V1 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Best3Q6H1V1 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm13714-201ENSMUST00000117313 221 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm12042-201ENSMUST00000120479 301 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm24787-201ENSMUST00000157380 123 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm26186-201ENSMUST00000157689 125 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm22315-201ENSMUST00000158010 143 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm7592-201ENSMUST00000160674 627 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm7582-201ENSMUST00000160831 603 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm27694-201ENSMUST00000184740 86 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm22249-201ENSMUST00000082485 136 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.87□□□□□ -1.79
Best3Q6H1V1 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.86□□□□□ -1.79
Best3Q6H1V1 Gm26215-201ENSMUST00000158584 139 ntBASIC3.86□□□□□ -1.79
Best3Q6H1V1 Gm22532-201ENSMUST00000158822 140 ntBASIC3.86□□□□□ -1.79
Best3Q6H1V1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Best3Q6H1V1 Gm20630-201ENSMUST00000177387 551 ntBASIC3.86□□□□□ -1.79
Best3Q6H1V1 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Best3Q6H1V1 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms